Protein Alignment pdm3 and pou4f1

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_001299795.1
• Gene: pou4f1 / 58057
• ZFINID: ZDB-GENE-000523-2
• Length: 366
• Species: Danio rerio
• Alignment Length: 512
• Identity: 118/512 - (23%)
• Similarity: 180/512 - (35%)
• Gaps: 188/512 - (36%)

  Fly   787 PETQ-THLHHH--------LQT-QSTSAVSSTLPQISLRHPDELTAPQMDLKPLELSASTSPPAP 841
            ||.: |.||..        ||| |..|.:.::|.:..|...:.|.|..     :.:|...|.|..
Zfish    18 PEHKYTTLHSSSEAIRRACLQTPQLQSNIFASLDETLLARAEALAAVD-----IAVSQGKSHPFK 77

  Fly   842 PPRHHFGHSLRGSSTVSPKHSPQGRMGGSGGSTTTGMNLSQHHERHDRLERLERQERHERRSHTP 906
            |...:  |::   :||.             .|:|:.:.|:.||..|..
Zfish    78 PDATY--HTM---NTVP-------------CSSTSTVPLAHHHHHHHH----------------- 107

  Fly   907 TATATRASVSSSSSAGHHGGSLPSGRLSPPSSAPSNSAANSISDRGYTSPLFRTHSPQGHALSLG 971
                            ||..:|....|....::||.:.                 .|..|..:.|
Zfish   108 ----------------HHHQNLEPADLMEHITSPSLAL-----------------MPSAHEGAGG 139

  Fly   972 GSPRLERDYLGNGPSSGTATSTSSCGAPTAAGSSATANVLSSINRLNASNGELTITKSLGAPTAT 1036
            |         |.|...|...|||             |:..|.::.|
Zfish   140 G---------GGGGGGGGLISTS-------------AHPHSHMHGL------------------- 163

  Fly  1037 ATRASSASPRDDSPGPGPSTSSVSHMQPLKLSP----SSRSEPPHLSPNGNDNDNDLLMDSPNEP 1097
             |..|..:...:||        :||.   .|.|    .:....|.|..||             .|
Zfish   164 -THLSHQAMNMNSP--------LSHH---GLLPGHHGGAHQGAPGLVNNG-------------LP 203

  Fly  1098 TINQATTNVVDGIDLDEIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGP---AYSQSAICSSALA 1159
            :||.:.|      |..|::.||:.||.||:.||:||..||.||:..:.|   :.|||.||
Zfish   204 SINDSDT------DPRELEAFAERFKQRRIKLGVTQADVGGALANLKIPGVGSLSQSTIC----- 257

  Fly  1160 AQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEESHWNRYKSGQNHLTDYIGVEPSK 1224
                          .||.|.::..:...:||:|:.|::|||.:  .|.|..:..:     ...|:
Zfish   258 --------------RFESLTLSHNNMIALKPILQAWLEEAEGA--QREKMSKPDI-----FNGSE 301

  Fly  1225 KRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALK 1281
            |:::|||........|.|:|.....||..:|..:|.:|..::.|:|:||||:||..|
Zfish   302 KKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	30/94 (32%)
		Homeobox	1228..1281	CDD:278475	19/52 (37%)
pou4f1	NP_001299795.1	POU	207..284	CDD:197673	31/101 (31%)
		Homeobox	305..358	CDD:278475	19/52 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810