Protein Alignment pdm3 and pou2f2a

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: XP_009290402.1
• Gene: pou2f2a / 557055
• ZFINID: ZDB-GENE-060310-2
• Length: 712
• Species: Danio rerio
• Alignment Length: 869
• Identity: 174/869 - (20%)
• Similarity: 243/869 - (27%)
• Gaps: 439/869 - (50%)

  Fly   447 PATAAALASLQGLAASVFNSPLNL-SVGGE--------------PVATTGPSVAPTSPTHNGGKS 496
            |.||:.|.:.:      ..|||.| |..||              ||....|  |..||..
Zfish    12 PRTASDLHAWR------LKSPLALRSHSGENSYGRLLDYIRMSKPVEVENP--AADSPME----- 63

  Fly   497 KTAKGGSSGNGSGGSSANSGTSSAQQQQQPDNPSSSSSPHHPLSASSLANVLAAATASPPPSLQA 561
                       |..|..|...|:.|.|....||.|.|.   .||:|..|.|......||   ..|
Zfish    64 -----------STDSERNGSDSNNQVQPMKINPFSISP---TLSSSIKAKVEDCGEMSP---TTA 111

  Fly   562 PPASAQM--PQLILASGQLVQGVQGAQLLIPTAQGIAVQTILTIPVSPQIPTTEQFLPNAFGAFA 624
            .||...:  .||:|..|||.    |...|:|.
Zfish   112 TPAQTALTHTQLMLTGGQLA----GLTALLPA--------------------------------- 139

  Fly   625 SYQQQQQQQQQQRDLLPPSLAALQHATALPQLAQTPTNLLKPNLFSTGVQQLLTALHPELFAAAA 689
              |||...||.|                               |.:..|||        ...|.|
Zfish   140 --QQQLLLQQAQ-------------------------------LLAAAVQQ--------SHVAHA 163

  Fly   690 ATHQQQQQQQQQQVQQQREREREREREREREREREREQHLGIGHLPHSHLAADLRRSAERSPTAG 754
            |..||.|||.|||..||..:::.:.:.:..:.:
Zfish   164 ANQQQAQQQAQQQANQQAAQQQSQGQSQSTQEQ-------------------------------- 196

  Fly   755 SPTGGSPGLAAKGPQPPPPGAAFLLQQQLHIKPETQTHLHHHLQTQSTSAVSSTLPQISLRHPDE 819
                     ||..|.|||              |....|                  |:.|..|.:
Zfish   197 ---------AAAAPVPPP--------------PPPPPH------------------QLPLSQPIQ 220

  Fly   820 LTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGSSTVSPKHSPQGRMGGSGGSTTTGMNLSQHH 884
            |||..:. :.|:|......|        ||:|...:......:.||:
Zfish   221 LTAQDIQ-QLLQLQQLVLVP--------GHTLPSPAQFLLPQTQQGQ------------------ 258

  Fly   885 ERHDRLERLERQERHERRSHTPTATATRASVSSSSSAGHHGGSLPSGRLSPPSSAPSNSAANSIS 949
                                                         .|.||.|:..|
Zfish   259 ---------------------------------------------QGLLSTPNLIP--------- 269

  Fly   950 DRGYTSPLFRTHSPQGHALS-LGGSPRL----ERDYLGNGPSSGTATSTSSCGAPTAAGSSATAN 1009
                        .||.:..| |...|||    :|:.:..
Zfish   270 ------------LPQQNQGSLLAAPPRLSLQAQREKIAE-------------------------- 296

  Fly  1010 VLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQPLKLSPSSRSE 1074
              ||:|.:                                      |:..||
Zfish   297 --SSLNTV--------------------------------------TTVTSH------------- 308

  Fly  1075 PPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGIDLDEIKEFAKAFKLRRLSLGLTQTQVGQA 1139
                               |.||:            ||:|:::||:.||.||:.||.||..||.|
Zfish   309 -------------------PEEPS------------DLEELEQFARTFKQRRIKLGFTQGDVGLA 342

  Fly  1140 LSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEESHW 1204
            :....|..:||:.|                   :.||.|:::.|:..|:||:||:|:.:|  :.:
Zfish   343 MGKLYGNDFSQTTI-------------------SRFEALNLSFKNMCKLKPLLEKWLTDA--AFF 386

  Fly  1205 NRYK----------SGQNHLTDYIGVE--PSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITG 1257
            |.|.          |..:..:..:|.|  |.::||:|||........|...|..|..|:..||..
Zfish   387 NVYSETMSMDSTLPSPSSLSSPSLGFEGLPGRRRKKRTSIETNVRVALEHSFLANQKPTSEEILL 451

  Fly  1258 LAHQLGYEREVIRIWFCNKRQALK 1281
            ::.:|..|:||||:||||:||..|
Zfish   452 ISEKLNMEKEVIRVWFCNRRQKEK 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	30/91 (33%)
		Homeobox	1228..1281	CDD:278475	21/52 (40%)
pou2f2a	XP_009290402.1	POU	310..383	CDD:197673	32/103 (31%)
		Homeobox	422..475	CDD:278475	21/52 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910