Protein Alignment pdm3 and pou2f3

DIOPT Version :10

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: XP_005172050.1
• Gene: pou2f3 / 553427
• ZFINID: ZDB-GENE-060512-299
• Length: 399
• Species: Danio rerio
• Alignment Length: 438
• Identity: 115/438 - (26%)
• Similarity: 166/438 - (37%)
• Gaps: 154/438 - (35%)

  Fly   873 STTTGMNLSQHHERHDRLER----LERQERHERRSHTPTATATRASVSSSSSAGH--HGGSLPSG 931
            ||.........||:.| :|:    ..||.:.|..:.:|.:       .||....|  .|..||.|
Zfish     2 STDAVEQTESQHEQAD-IEQNGIDFTRQIKTENLNDSPHS-------GSSHKTCHLTQGSPLPPG 58

  Fly   932 RLS--PPSSAP-------SNSAANSISDRGYTSPLFRTHSPQGH-ALSLGGSPRL-------ERD 979
            :|:  .||..|       ..|..:|      .|....:.:..|| .||| ..|.|       :..
Zfish    59 QLTGEMPSLHPLPQLVLMPGSHLSS------PSSFLLSQAQSGHQGLSL-LPPNLLSLPSQTQTG 116

  Fly   980 YLGNGPSSGTATSTSSCGAPTAAGSSATANVLSSINRLNASNGELTITKSLGAPTATATRASSAS 1044
            .|.:.|  |.|.:..:.|....||||              .:|.|
Zfish   117 LLPHQP--GLALTPQAMGRSGLAGSS--------------MDGHL-------------------- 145

  Fly  1045 PRDDSPGPGPSTSSVSHMQPLKLSPSSRSEPPHL-SPNGNDNDNDLLMDSPNEPTINQATTNVVD 1108
                         .:||:|          .|.|: ||          .|.||
Zfish   146 -------------DMSHLQ----------VPKHVGSP----------QDEPN------------- 164

  Fly  1109 GIDLDEIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQN 1173
              ||:|:::||||||.||:.||.||..||.|:....|..:||:.|                   :
Zfish   165 --DLEELEQFAKAFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI-------------------S 208

  Fly  1174 MFEKLDITPKSAQKIKPVLERWMKEAEESHWNRYKSGQNHLTDYIGVEP-----SKKRKRRTSFT 1233
            .||.|:::.|:..|:||:||:|:.:||       .|..:.:|:...:.|     .:|||:|||..
Zfish   209 RFEALNLSFKNMCKLKPLLEKWLSDAE-------NSPSDTMTNTTTLPPLMEGYGRKRKKRTSIE 266

  Fly  1234 PQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALK 1281
            ......|...|..|..|:..|||.::.||..|:||:|:||||:||..|
Zfish   267 TNIKLTLEKRFLDNPKPNSEEITLISEQLAMEKEVVRVWFCNRRQKEK 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:473999	32/91 (35%)
		Homeodomain	1226..1282	CDD:459649	25/56 (45%)
pou2f3	XP_005172050.1	POU	161..235	CDD:197673	35/107 (33%)
		Homeodomain	259..315	CDD:459649	25/56 (45%)