Protein Alignment pdm3 and pou2f1

DIOPT Version :10

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: XP_012812406.1
• Gene: pou2f1 / 549091
• XenbaseID: XB-GENE-853992
• Length: 764
• Species: Xenopus tropicalis
• Alignment Length: 570
• Identity: 141/570 - (24%)
• Similarity: 224/570 - (39%)
• Gaps: 159/570 - (27%)

  Fly   740 AADLRRSAERSPTAGSPTG-GSPGLAAKG----PQPPPPGAAFLLQQQLHIKPETQTHLHH-HLQ 798
            |||.|.:.....:..|.:| |:.|....|    .|..|.||....|.|..:     .|||. .|.
 Frog    20 AADARMNNPSETSKSSESGDGNTGTQTNGLDFQKQAVPIGAITSAQAQALL-----GHLHQVQLA 79

  Fly   799 TQSTSAVSSTLPQISLRHPDELTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGSSTVSPKHSP 863
            ..|..|.:.:| .:..:..:|         |.|.:.:..|...|       ||:.:       .|
 Frog    80 GTSLQAAAQSL-NVQTKFKEE---------PGEPTQAVQPSQQP-------SLQAA-------IP 120

  Fly   864 QGRMGGSGGSTTTGMNLSQHHERHDRLERLERQERHERRSHTPTATATRASVSSSSSAGHHGGSL 928
            |.::..:|| ..||:.|:...::. .|::.:.|         ..|.|.:.|.|...||.  |.::
 Frog   121 QTQLMVAGG-PITGLTLTPAQQQL-LLQQAQAQ---------LLAAAVQHSASQQHSAA--GATI 172

  Fly   929 PSGRLSPPSSAPSNSAANSISDRGYTSPLFRTHSPQGHALSLGGSPRLERDYL-----GNGPSSG 988
            .:...:|.:..|.:.......|      |.:....|...|:|       :.::     .|.|.:.
 Frog   173 SASAATPMTQIPLSQPIQIAQD------LQQLQQLQQQNLNL-------QQFVLVHPTTNLPPAQ 224

  Fly   989 TATSTSSCGAPTAAGSSATANVLSSI---NRLNASNGELTITKSLGAPTATATRASSASPRDDSP 1050
            ...|.:..|   ..|.....|:|:.:   ::.|....:.:||  |.:..||.||..:|:|
 Frog   225 FIISQTPQG---QQGLLQAQNLLTQLPQQSQANLLQSQPSIT--LTSQPATPTRTIAATP----- 279

  Fly  1051 GPGPSTSSVSHMQPLKLSPSSRSEPPHLSPNGNDNDNDLLMDSPN--EPTINQATTNVVDGIDLD 1113
                       :|.|   |.|::.|..:             |:|:  ||:            ||:
 Frog   280 -----------VQQL---PQSQTTPKRI-------------DTPSLEEPS------------DLE 305

  Fly  1114 EIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKL 1178
            |:::|||.||.||:.||.||..||.|:....|..:||:.|                   :.||.|
 Frog   306 ELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI-------------------SRFEAL 351

  Fly  1179 DITPKSAQKIKPVLERWMKEA------------EESHWNRYKSGQNHLTDYIGVEPSKKRKRRTS 1231
            :::.|:..|:||:||:|:.:|            .:|..|....|...|        :::||:|||
 Frog   352 NLSFKNMCKLKPLLEKWLNDAVLENITSDSSLSNQSVLNSPGHGMEGL--------NRRRKKRTS 408

  Fly  1232 FTPQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALK 1281
            ........|...|..|..|:..|||.:|.||..|:||||:||||:||..|
 Frog   409 IETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEK 458

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:473999	32/103 (31%)
		Homeodomain	1226..1282	CDD:459649	27/56 (48%)
pou2f1	XP_012812406.1	POU	299..372	CDD:197673	33/103 (32%)
		Homeodomain	403..459	CDD:459649	27/56 (48%)
		POU2F1_C	473..750	CDD:437368