DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdm3 and POU3F3

DIOPT Version :9

Sequence 1:NP_001188885.2 Gene:pdm3 / 35813 FlyBaseID:FBgn0261588 Length:1292 Species:Drosophila melanogaster
Sequence 2:NP_006227.1 Gene:POU3F3 / 5455 HGNCID:9216 Length:500 Species:Homo sapiens


Alignment Length:594 Identity:144/594 - (24%)
Similarity:191/594 - (32%) Gaps:249/594 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   728 HLGIGHLPHSHLAADLRRSA---ERSPTAGSPTG--GSPGLAAKGPQPPPP---------GAAFL 778
            |..:..|||:..||....:|   ..||.:||..|  |||   .:.||||||         ||.  
Human    95 HQWVTALPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSP---QQPPQPPPPPPQGPDVKGGAG-- 154

  Fly   779 LQQQLHIKPETQTHLHHHLQTQSTSAVSSTLPQISLRHPDELTAPQMDLKPLELSASTSPPAPPP 843
             :..||    ..|.|||                   |.|..|                .||.|||
Human   155 -RDDLH----AGTALHH-------------------RGPPHL----------------GPPPPPP 179

  Fly   844 RHHFGHSLRGSSTVSPKHSPQGRMGGSGGSTTTGMNLSQHHERHDRLERLERQERHERRSHTPTA 908
            .                   ||..||.|                                    |
Human   180 H-------------------QGHPGGWG------------------------------------A 189

  Fly   909 TATRASVSSSSSAGHHGGSLPSGRLSPPS----SAPSNSAANSISDRGYTSPLFRTHSPQGHALS 969
            .|..|:.:::::|..|..|:..|:..||.    |.|.....|.:                     
Human   190 AAAAAAAAAAAAAAAHLPSMAGGQQPPPQSLLYSQPGGFTVNGM--------------------- 233

  Fly   970 LGGSPRLERDYLGNGPSSGTATSTSSCGAPTAAGSSATANVLSSINRLNASNGELTITKSLGAPT 1034
            |...|         ||..|..          .||..|.:.|...:.|                  
Human   234 LSAPP---------GPGGGGG----------GAGGGAQSLVHPGLVR------------------ 261

  Fly  1035 ATATRASSASPRDDSPGPGPSTSS-----VSHMQPLKLSPSSRSEPPH-------LSPNGNDNDN 1087
                            |..|..:.     ..|..|....|.....|||       ..|..|.:|.
Human   262 ----------------GDTPELAEHHHHHHHHAHPHPPHPHHAQGPPHHGGGGGGAGPGLNSHDP 310

  Fly  1088 DLLMDSPNEPTINQATTNVVDGIDLDEIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSA 1152
            ....|:|..                |::::|||.||.||:.||.||..||.||....|..:||:.
Human   311 HSDEDTPTS----------------DDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTT 359

  Fly  1153 ICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEESHWNRYKSGQNHLTDY 1217
            ||                   .||.|.::.|:..|:||:|.:|::||:.|      :|.....|.
Human   360 IC-------------------RFEALQLSFKNMCKLKPLLNKWLEEADSS------TGSPTSIDK 399

  Fly  1218 IGVEPSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALKN 1282
            |..: .:|||:|||........|.:||.:...||..|||.||..|..|:||:|:||||:||..| 
Human   400 IAAQ-GRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEK- 462

  Fly  1283 TVRMMSKGM 1291
              ||...|:
Human   463 --RMTPPGI 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdm3NP_001188885.2 Pou 1108..1200 CDD:304656 31/91 (34%)
Homeobox 1228..1281 CDD:278475 24/52 (46%)
POU3F3NP_006227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..63
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..190 33/167 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..319 24/161 (15%)
POU 314..388 CDD:197673 33/108 (31%)
Homeobox 409..463 CDD:395001 25/56 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..500 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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