DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdm3 and POU3F3

DIOPT Version :10

Sequence 1:NP_001188885.2 Gene:pdm3 / 35813 FlyBaseID:FBgn0261588 Length:1292 Species:Drosophila melanogaster
Sequence 2:NP_006227.1 Gene:POU3F3 / 5455 HGNCID:9216 Length:500 Species:Homo sapiens


Alignment Length:594 Identity:144/594 - (24%)
Similarity:191/594 - (32%) Gaps:249/594 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   728 HLGIGHLPHSHLAADLRRSA---ERSPTAGSPTG--GSPGLAAKGPQPPPP---------GAAFL 778
            |..:..|||:..||....:|   ..||.:||..|  |||   .:.||||||         ||.  
Human    95 HQWVTALPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSP---QQPPQPPPPPPQGPDVKGGAG-- 154

  Fly   779 LQQQLHIKPETQTHLHHHLQTQSTSAVSSTLPQISLRHPDELTAPQMDLKPLELSASTSPPAPPP 843
             :..||    ..|.|||                   |.|..|                .||.|||
Human   155 -RDDLH----AGTALHH-------------------RGPPHL----------------GPPPPPP 179

  Fly   844 RHHFGHSLRGSSTVSPKHSPQGRMGGSGGSTTTGMNLSQHHERHDRLERLERQERHERRSHTPTA 908
            .                   ||..||.|                                    |
Human   180 H-------------------QGHPGGWG------------------------------------A 189

  Fly   909 TATRASVSSSSSAGHHGGSLPSGRLSPPS----SAPSNSAANSISDRGYTSPLFRTHSPQGHALS 969
            .|..|:.:::::|..|..|:..|:..||.    |.|.....|.:                     
Human   190 AAAAAAAAAAAAAAAHLPSMAGGQQPPPQSLLYSQPGGFTVNGM--------------------- 233

  Fly   970 LGGSPRLERDYLGNGPSSGTATSTSSCGAPTAAGSSATANVLSSINRLNASNGELTITKSLGAPT 1034
            |...|         ||..|..          .||..|.:.|...:.|                  
Human   234 LSAPP---------GPGGGGG----------GAGGGAQSLVHPGLVR------------------ 261

  Fly  1035 ATATRASSASPRDDSPGPGPSTSS-----VSHMQPLKLSPSSRSEPPH-------LSPNGNDNDN 1087
                            |..|..:.     ..|..|....|.....|||       ..|..|.:|.
Human   262 ----------------GDTPELAEHHHHHHHHAHPHPPHPHHAQGPPHHGGGGGGAGPGLNSHDP 310

  Fly  1088 DLLMDSPNEPTINQATTNVVDGIDLDEIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSA 1152
            ....|:|..                |::::|||.||.||:.||.||..||.||....|..:||:.
Human   311 HSDEDTPTS----------------DDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTT 359

  Fly  1153 ICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEESHWNRYKSGQNHLTDY 1217
            ||                   .||.|.::.|:..|:||:|.:|::||:.|      :|.....|.
Human   360 IC-------------------RFEALQLSFKNMCKLKPLLNKWLEEADSS------TGSPTSIDK 399

  Fly  1218 IGVEPSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALKN 1282
            |..: .:|||:|||........|.:||.:...||..|||.||..|..|:||:|:||||:||..| 
Human   400 IAAQ-GRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEK- 462

  Fly  1283 TVRMMSKGM 1291
              ||...|:
Human   463 --RMTPPGI 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdm3NP_001188885.2 Pou 1108..1200 CDD:473999 31/91 (34%)
Homeodomain 1226..1282 CDD:459649 26/55 (47%)
POU3F3NP_006227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..63
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..190 33/167 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..319 24/161 (15%)
POU 314..388 CDD:197673 33/108 (31%)
Homeodomain 407..463 CDD:459649 27/58 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..500 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.

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