DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdm3 and POU3F2

DIOPT Version :9

Sequence 1:NP_001188885.2 Gene:pdm3 / 35813 FlyBaseID:FBgn0261588 Length:1292 Species:Drosophila melanogaster
Sequence 2:NP_005595.2 Gene:POU3F2 / 5454 HGNCID:9215 Length:443 Species:Homo sapiens


Alignment Length:871 Identity:168/871 - (19%)
Similarity:220/871 - (25%) Gaps:487/871 - (55%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 HPHPHHGHQHHHHHPATAAALASLQGLAASVFNSPLNLSVGGEPVATTGPSVAPTSPTHNGGKSK 497
            |..|..|.|.      .|......|.|....:.:   |...|.|::.....:  |:.:|.||   
Human    20 HAEPPGGMQQ------GAGGYREAQSLVQGDYGA---LQSNGHPLSHAHQWI--TALSHGGG--- 70

  Fly   498 TAKGGSSGNGSGGSSANSGTSSAQQQQQPDNPSSSSSPHHPLSASSLANVLAAATASPPPSLQAP 562
             ..||..|.|.||.....|..|                  |.|.|.|..          |.::  
Human    71 -GGGGGGGGGGGGGGGGGGDGS------------------PWSTSPLGQ----------PDIK-- 104

  Fly   563 PASAQMPQLILASGQLVQGVQGAQLLIPTAQGIAVQTILTIPVSPQIPTTEQFLPNAFGAFASYQ 627
                  |.:::.     ||.:|.:|..|.|                                 .|
Human   105 ------PSVVVQ-----QGGRGDELHGPGA---------------------------------LQ 125

  Fly   628 QQQQQQQQQRDLLPPSLAALQHATALPQLAQTPTNLLKPNLFSTGVQQLLTALHPELFAAAAATH 692
            ||.||||||                                                        
Human   126 QQHQQQQQQ-------------------------------------------------------- 134

  Fly   693 QQQQQQQQQQVQQQREREREREREREREREREREQHLGIGHLPHSHLAADLRRSAERS----PTA 753
            ||||||||||.|||                 :|..|| :.|..:.|......|||..:    |:.
Human   135 QQQQQQQQQQQQQQ-----------------QRPPHL-VHHAANHHPGPGAWRSAAAAAHLPPSM 181

  Fly   754 GSPTGG----SP-----GLAAKGPQPPPPGAAFLLQQQLHIKPETQTHLHHHLQTQSTSAVSSTL 809
            |:..||    .|     |:...|.||                    ..||||....:...     
Human   182 GASNGGLLYSQPSFTVNGMLGAGGQP--------------------AGLHHHGLRDAHDE----- 221

  Fly   810 PQISLRHPDELTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGSSTVSPKHSPQGRMGGSGGST 874
            |..:..||...:.|..           .||.|||                   |||..|..|.  
Human   222 PHHADHHPHPHSHPHQ-----------QPPPPPP-------------------PQGPPGHPGA-- 254

  Fly   875 TTGMNLSQHHERHDRLERLERQERHERRSHTPTATATRASVSSSSSAGHHGGSLPSGRLSPPSSA 939
                    ||:.|                                                    
Human   255 --------HHDPH---------------------------------------------------- 259

  Fly   940 PSNSAANSISDRGYTSPLFRTHSPQGHALSLGGSPRLERDYLGNGPSSGTATSTSSCGAPTAAGS 1004
                     ||                                                      
Human   260 ---------SD------------------------------------------------------ 261

  Fly  1005 SATANVLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQPLKLSP 1069
                                                      :|:|     ||            
Human   262 ------------------------------------------EDTP-----TS------------ 267

  Fly  1070 SSRSEPPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGIDLDEIKEFAKAFKLRRLSLGLTQT 1134
                                                       |::::|||.||.||:.||.||.
Human   268 -------------------------------------------DDLEQFAKQFKQRRIKLGFTQA 289

  Fly  1135 QVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEA 1199
            .||.||....|..:||:.||                   .||.|.::.|:..|:||:|.:|::||
Human   290 DVGLALGTLYGNVFSQTTIC-------------------RFEALQLSFKNMCKLKPLLNKWLEEA 335

  Fly  1200 EESHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGY 1264
            :.|      ||.....|.|..: .:|||:|||........|.:||.:...||..|||.||..|..
Human   336 DSS------SGSPTSIDKIAAQ-GRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 393

  Fly  1265 EREVIRIWFCNKRQALKNTVRMMSKG 1290
            |:||:|:||||:||..|   ||...|
Human   394 EKEVVRVWFCNRRQKEK---RMTPPG 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdm3NP_001188885.2 Pou 1108..1200 CDD:304656 31/91 (34%)
Homeobox 1228..1281 CDD:278475 24/52 (46%)
POU3F2NP_005595.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..171 51/258 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..267 28/292 (10%)
POU 262..336 CDD:197673 35/152 (23%)
Homeobox 357..411 CDD:395001 25/56 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..443 4/11 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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