DRSC/TRiP Functional Genomics Resources

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Protein Alignment pdm3 and POU3F1

DIOPT Version :9

Sequence 1:NP_001188885.2 Gene:pdm3 / 35813 FlyBaseID:FBgn0261588 Length:1292 Species:Drosophila melanogaster
Sequence 2:NP_002690.3 Gene:POU3F1 / 5453 HGNCID:9214 Length:451 Species:Homo sapiens


Alignment Length:542 Identity:133/542 - (24%)
Similarity:180/542 - (33%) Gaps:171/542 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   756 PTGGSPGLAAKGPQPPP----PGAAFLLQQQLHIKP---ETQTHLHHHLQTQSTSAVSSTLPQIS 813
            |.|...|....||...|    ..||....::||...   |.|..:||........          
Human     9 PRGPGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAG---------- 63

  Fly   814 LRHPDELTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGSSTVSPKHSPQGRMGGSG-GSTTTG 877
              ||..|..||.                .|....|    |.......|...|:.||.| |....|
Human    64 --HPVGLAHPQW----------------LPTGGGG----GGDWAGGPHLEHGKAGGGGTGRADDG 106

  Fly   878 MNLSQHHERHDRLERLERQERHERRSHTPTATATRASVSSSSSAGHHGGSLPSGRLSPPSSAPSN 942
            ......|.|          ..|:..:|...|.|       ..|..||.|         |:.:||.
Human   107 GGGGGFHAR----------LVHQGAAHAGAAWA-------QGSTAHHLG---------PAMSPSP 145

  Fly   943 SAANSISDRGYTSPLFRTHSPQGHALSLGGSPRLERDYLGNGPSSGTATSTSSCGAPTAAGSSAT 1007
            .|:..             |.||...|      ..:..|.|.| ..|.|      |...|.|..|.
Human   146 GASGG-------------HQPQPLGL------YAQAAYPGGG-GGGLA------GMLAAGGGGAG 184

  Fly  1008 ANVLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQPLKLSPSSR 1072
            ..:..:::. :....:|                        .|.|.|...:..|......:....
Human   185 PGLHHALHE-DGHEAQL------------------------EPSPPPHLGAHGHAHGHAHAGGLH 224

  Fly  1073 SEPPHLSPN--------GNDNDNDLLMDSPNEPTINQATTNVVDGIDLDEIKEFAKAFKLRRLSL 1129
            :...||.|.        |..:|.    |:|:.                |::::|||.||.||:.|
Human   225 AAAAHLHPGAGGGGSSVGEHSDE----DAPSS----------------DDLEQFAKQFKQRRIKL 269

  Fly  1130 GLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLER 1194
            |.||..||.||....|..:||:.||                   .||.|.::.|:..|:||:|.:
Human   270 GFTQADVGLALGTLYGNVFSQTTIC-------------------RFEALQLSFKNMCKLKPLLNK 315

  Fly  1195 WMKEAEESHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLA 1259
            |::|.:.|      ||.....|.|..: .:|||:|||........|.:||.:...||..||||||
Human   316 WLEETDSS------SGSPTNLDKIAAQ-GRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLA 373

  Fly  1260 HQLGYEREVIRIWFCNKRQALK 1281
            ..|..|:||:|:||||:||..|
Human   374 DSLQLEKEVVRVWFCNRRQKEK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pdm3NP_001188885.2 Pou 1108..1200 CDD:304656 31/91 (34%)
Homeobox 1228..1281 CDD:278475 25/52 (48%)
POU3F1NP_002690.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 3/11 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..114 12/64 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..154 11/55 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..253 12/111 (11%)
POU 247..321 CDD:197673 33/112 (29%)
Homeobox 342..396 CDD:395001 26/54 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..451 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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