Protein Alignment pdm3 and acj6

DIOPT Version :10

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_524876.1
• Gene: acj6 / 47080
• FlyBaseID: FBgn0000028
• Length: 396
• Species: Drosophila melanogaster
• Alignment Length: 262
• Identity: 73/262 - (27%)
• Similarity: 121/262 - (46%)
• Gaps: 53/262 - (20%)

  Fly  1056 TSSVSHMQPLKLSPSSRSEPPHLSPNGNDNDNDLLMDSPNEPTIN-------------------- 1100
            |.|::.:.|:..||.:   |.|...:|:.:..:.:|...:..|::
  Fly   152 TGSMTTLAPISESPLT---PTHQHLHGSYHSMNHMMSHHHPGTLSGHTGGHHGHSAVHHPVITAA 213

  Fly  1101 QATTNVVDGIDLD--EIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGP---AYSQSAICSSALAA 1160
            .|...:....|.|  |::.||:.||.||:.||:||..||:||:..:.|   |.|||.||
  Fly   214 VAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTIC------ 272

  Fly  1161 QMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEESHWNRYKSGQNHLTDYIGVEPS-K 1224
                         .||.|.::..:...:||:|:.|::|||....|:.:.     .|...|.|: :
  Fly   273 -------------RFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRD-----PDAPSVLPAGE 319

  Fly  1225 KRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALKNTVRMMSK 1289
            |:::|||........|.|:|.....|||.:|..:|.:|..::.|:|:||||:||..|..|..::.
  Fly   320 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRIVSSVTP 384

  Fly  1290 GM 1291
            .|
  Fly   385 SM 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:473999	32/96 (33%)
		Homeodomain	1226..1282	CDD:459649	20/55 (36%)
acj6	NP_524876.1	POU	222..299	CDD:197673	32/95 (34%)
		Homeodomain	321..377	CDD:459649	20/55 (36%)