Sequence 1: | NP_001188885.2 | Gene: | pdm3 / 35813 | FlyBaseID: | FBgn0261588 | Length: | 1292 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001002822.2 | Gene: | Cchcr1 / 406196 | RGDID: | 1302992 | Length: | 869 | Species: | Rattus norvegicus |
Alignment Length: | 334 | Identity: | 84/334 - (25%) |
---|---|---|---|
Similarity: | 136/334 - (40%) | Gaps: | 64/334 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 539 LSASSLANVLAAATASPPPSLQAPP---ASAQMPQL----------ILASGQLVQGVQGAQLLIP 590
Fly 591 TAQGIAVQTILTIPVSPQIPTTEQFLPNAFGAFASYQQQ-------QQQQQQQRDLLPPSLAALQ 648
Fly 649 --HATALPQLAQTPTNLLKPNLFSTGVQQLLTALHPELFAAAA-------ATHQQQQQQQQQQVQ 704
Fly 705 QQREREREREREREREREREREQHLGIGHLPHSHLAADLRRSAERSPTAGSPTGGSPGLAAKGPQ 769
Fly 770 PPPPGAAFLLQQQLHIKPETQTHLHHHLQTQSTSAVSSTLPQISLRHPDELTAPQMDLKPLELSA 834
Fly 835 ST-SPPAPP 842 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pdm3 | NP_001188885.2 | Pou | 1108..1200 | CDD:304656 | |
Homeobox | 1228..1281 | CDD:278475 | |||
Cchcr1 | NP_001002822.2 | HCR | 110..853 | CDD:284517 | 79/326 (24%) |
DUF342 | <305..384 | CDD:302792 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3802 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |