Protein Alignment pdm3 and pou1f1

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_998016.1
• Gene: pou1f1 / 405777
• ZFINID: ZDB-GENE-040630-7
• Length: 350
• Species: Danio rerio
• Alignment Length: 382
• Identity: 106/382 - (27%)
• Similarity: 165/382 - (43%)
• Gaps: 89/382 - (23%)

  Fly   938 SAPSNSAANSIS----DRGYTSPLFRTHSPQG--HALSL-----GGSPRLERDYLGNGPSSGTAT 991
            |..:.|.::|.|    |.|...||...||...  |..::     .|.|.::     :...|....
Zfish     2 SCQAFSTSDSFSGLGGDTGAALPLLMHHSAAADCHNTNICSTVPSGLPLVQ-----SSKRSHMHL 61

  Fly   992 STSSCGAPTA-----------AGSSATANVLSSINRLNASNGELTITKSLGAPTATATRASSA-- 1043
            |||:.|..:|           :....|..::::...|:||..:..|.::...|.|.....:::
Zfish    62 STSALGNASASLHYPMPPCHYSNQQTTYGMMAAQEMLSASISQTRILQTCSVPHANMVNGANSLQ 126

  Fly  1044 ---SPR-----DDSPGPGPSTSSVSH-MQPLKLSPSSRSEPPHLSPNGNDNDNDLLMDSPNEPTI 1099
               :||     :.|...|  :.::|| ..||              |.....|..:|.|...|...
Zfish   127 GALAPRLYKFPEHSLAGG--SCALSHGFAPL--------------PQTLLTDEPILGDIKQELRR 175

  Fly  1100 NQAT---TNVVDGIDLDEIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQ 1161
            ...|   |..:|...:.|:::||..|||||:.||.|||.||:||:...|..:||:.||
Zfish   176 KSRTLDETPDMDSPQIRELEKFANDFKLRRIKLGYTQTNVGEALAAVHGSEFSQTTIC------- 233

  Fly  1162 MYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEESH--WNRYKSGQNHLTDYIGVEPSK 1224
                        .||.|.::.|:|.|:|.:|.:|::|||::.  :|. |.|.:          .:
Zfish   234 ------------RFENLQLSFKNACKLKSILAKWLEEAEQAGALFNE-KMGLH----------ER 275

  Fly  1225 KRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALK 1281
            ||||||:.:..|.|.|...|...:.||..||..:|..|..|:||:|:||||:||..|
Zfish   276 KRKRRTTISLGAKEALERSFVEKSKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQREK 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	33/91 (36%)
		Homeobox	1228..1281	CDD:278475	23/52 (44%)
pou1f1	NP_998016.1	POU	186..260	CDD:197673	33/92 (36%)
		Homeobox	279..332	CDD:278475	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810