Protein Alignment pdm3 and pdm2

DIOPT Version :10

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_723763.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Alignment Length: 1017
• Identity: 216/1017 - (21%)
• Similarity: 334/1017 - (32%)
• Gaps: 361/1017 - (35%)

  Fly   440 HQHHHH------HPATAAALASLQGLAASVFNSPLNLSVGGEPVATTGPSVAPTSPTHNGGKSKT 498
            :.||.|      ..|.|||.|.....||:...:.:.|:             :||:.||....:.:
  Fly    12 NSHHQHLSTTATETAAAAATAKAAATAAAAATATMLLT-------------SPTAATHCLAAATS 63

  Fly   499 AKGGS---SGNGSGGSSANSGTSSAQQQQQPD------------NPSSSSSPHHPLSASSLANVL 548
            |.|.:   :|.|.      |.|.:..|.|.|.            ||..:..|..|.|..:...:|
  Fly    64 AAGVNVQITGQGV------SATLNDDQLQLPANYAANVGHLNGFNPKDNCPPVPPTSERAFEGLL 122

  Fly   549 AAA--------TASPPPSLQAPPASAQMPQLILASGQLVQGVQGAQLLIP----TAQGIAV---- 597
            ...        ..|||......|.:.|...   |:..|....:|..:|.|    .|.||..
  Fly   123 RLPQIQVKQEFMESPPERPSCHPMNHQQAP---ANSALATSCRGKTILNPWYLRPADGIGYHNYN 184

  Fly   598 ----------------------------QTILTIPVS-------PQIPTTEQFLPNAFGAFASYQ 627
                                        ||.|  |||       ..:...::.||:.........
  Fly   185 SNNNNSGSGEINKDVSQQMTSACGGSDGQTCL--PVSYFGMETLASVKQRQKSLPDFLIPLHEIM 247

  Fly   628 QQQQQQQQQRDL------LPPSLAALQHATALPQLAQTPTNLLKPNLFS--------------TG 672
            .|||...|||.:      |||.|....     ||..:|..:|..|....              ||
  Fly   248 FQQQHHYQQRTMGTLINSLPPGLVGYP-----PQKTETFKSLTPPKALQHHQNNQNHQIPQNHTG 307

  Fly   673 VQQLLTALH--PELFAAAAATHQQQQQQQQQQVQQQREREREREREREREREREREQHLGIGHLP 735
            ....:...|  ..|.        ::.|.:.||::...|..:|:|::.|:|.|..|:.|:....|.
  Fly   308 DHSFVRHFHERDRLI--------REHQLKHQQLRDVEEVLQEQEQDEEQEHETLRKPHVVPSELE 364

  Fly   736 HSH----LAADLRRSAERSPTAGSPTGGSPGLAAKGPQPP-----------------PPGAAFLL 779
            |:|    :..|....|.|......|..|...|... .|||                 ||....:.
  Fly   365 HNHHWHGVVCDANGHATRLLHIAPPRAGPTPLPTH-QQPPVGEVLPPNSTSFSTIVDPPKEPSIY 428

  Fly   780 QQQL----HIKPETQTHLHHHLQTQSTSAVSS-------------------TLPQ-ISLRH---- 816
            :|..    |.:|..:...|........|.:.|                   .:|| :|.:.
  Fly   429 EQPAPNGRHCRPANKVMRHMSNSPTPPSPLRSLSDCGKSFEEEELELGENCEMPQNLSSKRQARE 493

  Fly   817 -PDELTAPQMDLKP----------LELSASTSPPAP----PPRHHFGHSLRGSSTV------SPK 860
             ..||....:||.|          .|..||.:||.|    |...|....|:..|.:      :|:
  Fly   494 LDSELENEVLDLAPPPKRLAEEQEEEKVASVNPPQPVAFAPEEMHQALQLQLHSYIEMVRQLAPE 558

  Fly   861 HSPQGRMGGSGGSTTTGMNLSQHHERHDRLERLERQERHE--RRSHTPTATATRASVSSSSSAGH 923
            ..|...:    .:.....|..|...:...|:::::|:|.:  ....||.|.:...|.|.|....|
  Fly   559 AFPNPNL----ATQFLLQNSLQALAQFQALQQMKQQQREDPLPSYSTPLAKSPLRSPSLSPVPRH 619

  Fly   924 HGGSLPSGRLSPPSSAPSNSAANSISDRGYTSPLFRTHSPQGHALSLGGSPRLERDYLGNGPSSG 988
            .    .|.:.:||:|..:||.       |.:|.:...::|     |:...|:|:
  Fly   620 S----KSQQRTPPNSMTANSL-------GMSSAVMTPNTP-----SMQQQPQLQ----------- 657

  Fly   989 TATSTSSCGAPTAAGSSATANVLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPG 1053
                                                   :|...||:..|.||:.:..:.||
  Fly   658 ---------------------------------------QSTPKPTSGLTVASAMAKLEQSP--- 680

  Fly  1054 PSTSSVSHMQPLKLSPSSRSEPPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGIDLDEIKEF 1118
                                                           :.||      ||:|:::|
  Fly   681 -----------------------------------------------EETT------DLEELEQF 692

  Fly  1119 AKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPK 1183
            ||.||.||:.||.||..||.|:....|..:||:.|                   :.||.|:::.|
  Fly   693 AKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI-------------------SRFEALNLSFK 738

  Fly  1184 SAQKIKPVLERWMKEAEESHWNRYKSGQ-----NHLTDYIGVEP----SKKRKRRTSFTPQALEL 1239
            :..|:||:|::|:::|:.:   ..|||.     |.:|..:...|    .::||:|||........
  Fly   739 NMCKLKPLLQKWLEDADST---VAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTT 800

  Fly  1240 LNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALK 1281
            |...|..|..|:..||:.|:.:|..::||||:||||:||..|
  Fly   801 LEKAFLMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEK 842

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:473999	30/91 (33%)
		Homeodomain	1226..1282	CDD:459649	24/56 (43%)
pdm2	NP_723763.1	PHA03247	<375..675	CDD:223021	67/370 (18%)
		POU	691..755	CDD:197673	27/82 (33%)
		Homeodomain	787..843	CDD:459649	24/56 (43%)