Protein Alignment pdm3 and Pou3f4

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_058948.1
• Gene: Pou3f4 / 29589
• RGDID: 61947
• Length: 361
• Species: Rattus norvegicus
• Alignment Length: 374
• Identity: 114/374 - (30%)
• Similarity: 159/374 - (42%)
• Gaps: 101/374 - (27%)

  Fly   966 HALSLG---GSP------RLERDYLGNGPSSG------TATSTSSCGAPTAAGSSATANVLSSIN 1015
            ||.|.|   |||      .|:.|||...||:|      ..||.|. |.|   .||..|.  |.::
  Rat    19 HADSAGMQQGSPFRNPQKLLQSDYLQGVPSNGHPLGHHWVTSLSD-GGP---WSSTLAT--SPLD 77

  Fly  1016 RLNASNGELTITKSLGAPT-ATATRASSASPRDDSP-----GPGPSTSSVSHMQPLK-------- 1066
            :.:...|...:  .|||.. ..:...:..||..:.|     .|.|::|..|..|||.
  Rat    78 QQDVKPGREDL--QLGAIIHHRSPHVAHHSPHTNHPNAWGASPAPNSSITSSGQPLNVYSQPGFT 140

  Fly  1067 ---------LSP-----SSRS------EPPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGID 1111
                     |:|     |::|      |||.....|:.:    ..|..:|.|...
  Rat   141 VSGMLEHGGLTPPPAAASTQSLHPVLREPPDHGELGSHH----CQDHSDEETPTS---------- 191

  Fly  1112 LDEIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFE 1176
             ||:::|||.||.||:.||.||..||.||....|..:||:.||                   .||
  Rat   192 -DELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC-------------------RFE 236

  Fly  1177 KLDITPKSAQKIKPVLERWMKEAEESHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLN 1241
            .|.::.|:..|:||:|.:|::||:.|      :|.....|.|..: .:|||:|||.......:|.
  Rat   237 ALQLSFKNMCKLKPLLNKWLEEADSS------TGSPTSIDKIAAQ-GRKRKKRTSIEVSVKGVLE 294

  Fly  1242 AHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALKNTVRMMSKG 1290
            .||.:...|:..||:.||..|..|:||:|:||||:||..|   ||...|
  Rat   295 THFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEK---RMTPPG 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	32/91 (35%)
		Homeobox	1228..1281	CDD:278475	22/52 (42%)
Pou3f4	NP_058948.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	99..131		8/31 (26%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	144..192		11/62 (18%)
		POU	186..260	CDD:197673	34/103 (33%)
		Homeobox	281..335	CDD:395001	23/56 (41%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	334..361		4/10 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810