Protein Alignment pdm3 and Pou3f2

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_742082.2
• Gene: Pou3f2 / 29588
• RGDID: 61946
• Length: 445
• Species: Rattus norvegicus
• Alignment Length: 871
• Identity: 168/871 - (19%)
• Similarity: 218/871 - (25%)
• Gaps: 485/871 - (55%)

  Fly   433 HPHPHHGHQHHHHHPATAAALASLQGLAASVFNSPLNLSVGGEPVATTGPSVAPTSPTHNGGKSK 497
            |..|..|.|.      .|......|.|....:.:   |...|.|::.....:...|...:||
  Rat    20 HAEPPGGMQQ------GAGGYREAQSLVQGDYGA---LQSNGHPLSHAHQWITALSHGGSGG--- 72

  Fly   498 TAKGGSSGNGSGGSSANSGTSSAQQQQQPDNPSSSSSPHHPLSASSLANVLAAATASPPPSLQAP 562
               ||..|.|.||.....|..|                  |.|.|.|..          |.::
  Rat    73 ---GGGGGGGGGGGGGGGGDGS------------------PWSTSPLGQ----------PDIK-- 104

  Fly   563 PASAQMPQLILASGQLVQGVQGAQLLIPTAQGIAVQTILTIPVSPQIPTTEQFLPNAFGAFASYQ 627
                  |.:::.     ||.:|.:|..|                              ||.....
  Rat   105 ------PSVVVQ-----QGGRGDELHGP------------------------------GALQQQH 128

  Fly   628 QQQQQQQQQRDLLPPSLAALQHATALPQLAQTPTNLLKPNLFSTGVQQLLTALHPELFAAAAATH 692
            |||||||||
  Rat   129 QQQQQQQQQ-------------------------------------------------------- 137

  Fly   693 QQQQQQQQQQVQQQREREREREREREREREREREQHLGIGHLPHSHLAADLRRSAERS----PTA 753
            ||||||||||.|||                  |..|| :.|..:.|......|||..:    |:.
  Rat   138 QQQQQQQQQQQQQQ------------------RPPHL-VHHAANHHPGPGAWRSAAAAAHLPPSM 183

  Fly   754 GSPTGG----SP-----GLAAKGPQPPPPGAAFLLQQQLHIKPETQTHLHHHLQTQSTSAVSSTL 809
            |:..||    .|     |:...|.||                    ..||||....:...
  Rat   184 GASNGGLLYSQPSFTVNGMLGAGGQP--------------------AGLHHHGLRDAHDE----- 223

  Fly   810 PQISLRHPDELTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGSSTVSPKHSPQGRMGGSGGST 874
            |..:..||...:.|..           .||.|||                   |||..|..|.
  Rat   224 PHHADHHPHPHSHPHQ-----------QPPPPPP-------------------PQGPPGHPGA-- 256

  Fly   875 TTGMNLSQHHERHDRLERLERQERHERRSHTPTATATRASVSSSSSAGHHGGSLPSGRLSPPSSA 939
                    ||:.|
  Rat   257 --------HHDPH---------------------------------------------------- 261

  Fly   940 PSNSAANSISDRGYTSPLFRTHSPQGHALSLGGSPRLERDYLGNGPSSGTATSTSSCGAPTAAGS 1004
                     ||
  Rat   262 ---------SD------------------------------------------------------ 263

  Fly  1005 SATANVLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQPLKLSP 1069
                                                      :|:|     ||
  Rat   264 ------------------------------------------EDTP-----TS------------ 269

  Fly  1070 SSRSEPPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGIDLDEIKEFAKAFKLRRLSLGLTQT 1134
                                                       |::::|||.||.||:.||.||.
  Rat   270 -------------------------------------------DDLEQFAKQFKQRRIKLGFTQA 291

  Fly  1135 QVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEA 1199
            .||.||....|..:||:.||                   .||.|.::.|:..|:||:|.:|::||
  Rat   292 DVGLALGTLYGNVFSQTTIC-------------------RFEALQLSFKNMCKLKPLLNKWLEEA 337

  Fly  1200 EESHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGY 1264
            :.|      ||.....|.|..: .:|||:|||........|.:||.:...||..|||.||..|..
  Rat   338 DSS------SGSPTSIDKIAAQ-GRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 395

  Fly  1265 EREVIRIWFCNKRQALKNTVRMMSKG 1290
            |:||:|:||||:||..|   ||...|
  Rat   396 EKEVVRVWFCNRRQKEK---RMTPPG 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	31/91 (34%)
		Homeobox	1228..1281	CDD:278475	24/52 (46%)
Pou3f2	NP_742082.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..173		52/261 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	203..269		28/292 (10%)
		POU	264..338	CDD:197673	35/152 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	336..361		10/31 (32%)
		Homeobox	359..412	CDD:278475	24/52 (46%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	411..445		4/11 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810