Protein Alignment pdm3 and Pou1f1

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: XP_006248036.1
• Gene: Pou1f1 / 25517
• RGDID: 3367
• Length: 317
• Species: Rattus norvegicus
• Alignment Length: 370
• Identity: 110/370 - (29%)
• Similarity: 159/370 - (42%)
• Gaps: 80/370 - (21%)

  Fly   937 SSAPSNSAANSI---SDRGYTSPLFRTHSPQGHALSLGGSPRLERDYLGNGPSSGTATSTSSCGA 998
            |..|..||...|   ||.....|| |.|......|                |:|..||:.
  Rat     2 SCQPFTSADTFIPLNSDASAALPL-RMHHSAAEGL----------------PASNHATNV----- 44

  Fly   999 PTAAGSSATANVLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQ 1063
                 .|...::||.|......:...::| ::| .|||....|..|..   .|..|||..|   .
  Rat    45 -----MSTVPSILSLIQTPKCLHTYFSMT-TMG-NTATGLHYSVPSCH---YGNQPSTYGV---M 96

  Fly  1064 PLKLSPSSRSEPPH-LSPNGNDNDNDLLMDSPNEPTINQATTN----VVDGIDLD-----EIKEF 1118
            ...|:|.....|.| ||.........||.:.|......|....    |.:.||:|     |:::|
  Rat    97 AGTLTPCLYKFPDHTLSHGFPPLHQPLLAEDPTASEFKQELRRKSKLVEEPIDMDSPEIRELEQF 161

  Fly  1119 AKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPK 1183
            |..||:||:.||.|||.||:||:...|..:||:.||                   .||.|.::.|
  Rat   162 ANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTIC-------------------RFENLQLSFK 207

  Fly  1184 SAQKIKPVLERWMKEAEE--SHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNAHFER 1246
            :|.|:|.:|.:|::|||:  :.:|. |.|.|          .:||||||:.:..|.:.|..||..
  Rat   208 NACKLKAILSKWLEEAEQVGALYNE-KVGAN----------ERKRKRRTTISIAAKDALERHFGE 261

  Fly  1247 NTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALKNTVRMMSKGM 1291
            ::.||..||..:|.:|..|:||:|:||||:||..|.....:::.:
  Rat   262 HSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKTSLNQSL 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	34/96 (35%)
		Homeobox	1228..1281	CDD:278475	23/52 (44%)
Pou1f1	XP_006248036.1	POU	150..224	CDD:197673	32/92 (35%)
		Homeobox	243..297	CDD:395001	23/53 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810