Protein Alignment pdm3 and Pou1f1

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_032875.1
• Gene: Pou1f1 / 18736
• MGIID: 97588
• Length: 291
• Species: Mus musculus
• Alignment Length: 320
• Identity: 99/320 - (30%)
• Similarity: 144/320 - (45%)
• Gaps: 64/320 - (20%)

  Fly   995 SCGAPTAAGSSATANV-----------LSSINRLNASNGELTITKSLGAPTATATRASSASPRDD 1048
            ||.:.|:|.:..|.|.           .|:...|.|||....:..     |||....|..|..
Mouse     2 SCQSFTSADTFITLNSDASAALPLRMHHSAAECLPASNHATNVMS-----TATGLHYSVPSCH-- 59

  Fly  1049 SPGPGPSTSSVSHMQPLKLSPSSRSEPPH-LSPNGNDNDNDLLMDSPNEPTINQATTN----VVD 1108
             .|..|||..|   ....|:|.....|.| ||.........||.:.|......|....    |.:
Mouse    60 -YGNQPSTYGV---MAGSLTPCLYKFPDHTLSHGFPPLHQPLLAEDPAASEFKQELRRKSKLVEE 120

  Fly  1109 GIDLD-----EIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLS 1168
            .||:|     |:::||..||:||:.||.|||.||:||:...|..:||:.||
Mouse   121 PIDMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTIC-------------- 171

  Fly  1169 TQQQNMFEKLDITPKSAQKIKPVLERWMKEAEE--SHWNRYKSGQNHLTDYIGVEPSKKRKRRTS 1231
                 .||.|.::.|:|.|:|.:|.:|::|||:  :.:|. |.|.|          .:||||||:
Mouse   172 -----RFENLQLSFKNACKLKAILSKWLEEAEQVGALYNE-KVGAN----------ERKRKRRTT 220

  Fly  1232 FTPQALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALKNTVRMMSKGM 1291
            .:..|.:.|..||..::.||..||..:|.:|..|:||:|:||||:||..|.....:::.:
Mouse   221 ISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKTSLNQSL 280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	34/96 (35%)
		Homeobox	1228..1281	CDD:278475	23/52 (44%)
Pou1f1	NP_032875.1	POU	124..198	CDD:197673	32/92 (35%)
		Homeobox	217..270	CDD:278475	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910