Protein Alignment pdm3 and ceh-6

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_492304.1
• Gene: ceh-6 / 172640
• WormBaseID: WBGene00000431
• Length: 380
• Species: Caenorhabditis elegans
• Alignment Length: 405
• Identity: 100/405 - (24%)
• Similarity: 165/405 - (40%)
• Gaps: 100/405 - (24%)

  Fly   906 PTATATRASVSSSSSAGHHGGSLPSGRLSPPSSAPS------------NSAAN----------SI 948
            |::::..:|:|:|:| .....||....:|..:..|:            ..|||          :.
 Worm     4 PSSSSIPSSLSASAS-DSEPSSLNGSGISDQNILPNYHLHHHLINENEMEAANYAQVIKPTCEAF 67

  Fly   949 SDRGYTSPLFRTHSPQGHALSLGGSPRLERDY--LGNG--PSSGTATSTSSCGAPTAAGSSATAN 1009
            .|..:|..|::  .||.|.:    .|:.:..|  |...  |......||::..|.|.|..|:..|
 Worm    68 QDWPHTPMLYQ--QPQLHFM----LPQHDWAYPHLAQSLPPPHHLTPSTAAVAAATIASQSSIIN 126

  Fly  1010 VLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQPLKLSPSSRSE 1074
                                   .|:..|...|...:.:...|    ..:..:.|        ..
 Worm   127 -----------------------QTSVVTSTPSCQIKQEVERP----EIIQRLMP--------PW 156

  Fly  1075 PPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGIDL---DEIKEFAKAFKLRRLSLGLTQTQV 1136
            ||....:.:|:.:......|::|     .:::.|..:.   |:::.|||.||.||:.||.||..|
 Worm   157 PPAYQFSCDDSGSVSGAGGPHQP-----LSDISDDSEQTCPDDLEGFAKQFKQRRIKLGYTQADV 216

  Fly  1137 GQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEE 1201
            |.||....|..:||:.||                   .||.|.::.|:..|:||:|.:|::||:.
 Worm   217 GVALGTLYGNIFSQTTIC-------------------RFEALQLSFKNMCKLKPLLFKWLEEADS 262

  Fly  1202 SHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYER 1266
            :     ....|...:.:..:..:|||:|||........|..||:.|..|:..|||.:|.:|..|:
 Worm   263 T-----TGSPNSTFEKMTGQAGRKRKKRTSIEVNVKSRLEFHFQSNQKPNAQEITQVAMELQLEK 322

  Fly  1267 EVIRIWFCNKRQALK 1281
            ||:|:||||:||..|
 Worm   323 EVVRVWFCNRRQKEK 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	32/94 (34%)
		Homeobox	1228..1281	CDD:278475	23/52 (44%)
ceh-6	NP_492304.1	POU	188..261	CDD:197673	31/91 (34%)
		Homeobox	284..337	CDD:278475	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810