Protein Alignment pdm3 and ceh-6

DIOPT Version :10

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_492304.1
• Gene: ceh-6 / 172640
• WormBaseID: WBGene00000431
• Length: 380
• Species: Caenorhabditis elegans
• Alignment Length: 405
• Identity: 100/405 - (24%)
• Similarity: 165/405 - (40%)
• Gaps: 100/405 - (24%)

  Fly   906 PTATATRASVSSSSSAGHHGGSLPSGRLSPPSSAPS------------NSAAN----------SI 948
            |::::..:|:|:|:| .....||....:|..:..|:            ..|||          :.
 Worm     4 PSSSSIPSSLSASAS-DSEPSSLNGSGISDQNILPNYHLHHHLINENEMEAANYAQVIKPTCEAF 67

  Fly   949 SDRGYTSPLFRTHSPQGHALSLGGSPRLERDY--LGNG--PSSGTATSTSSCGAPTAAGSSATAN 1009
            .|..:|..|::  .||.|.:    .|:.:..|  |...  |......||::..|.|.|..|:..|
 Worm    68 QDWPHTPMLYQ--QPQLHFM----LPQHDWAYPHLAQSLPPPHHLTPSTAAVAAATIASQSSIIN 126

  Fly  1010 VLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQPLKLSPSSRSE 1074
                                   .|:..|...|...:.:...|    ..:..:.|        ..
 Worm   127 -----------------------QTSVVTSTPSCQIKQEVERP----EIIQRLMP--------PW 156

  Fly  1075 PPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGIDL---DEIKEFAKAFKLRRLSLGLTQTQV 1136
            ||....:.:|:.:......|::|     .:::.|..:.   |:::.|||.||.||:.||.||..|
 Worm   157 PPAYQFSCDDSGSVSGAGGPHQP-----LSDISDDSEQTCPDDLEGFAKQFKQRRIKLGYTQADV 216

  Fly  1137 GQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEE 1201
            |.||....|..:||:.||                   .||.|.::.|:..|:||:|.:|::||:.
 Worm   217 GVALGTLYGNIFSQTTIC-------------------RFEALQLSFKNMCKLKPLLFKWLEEADS 262

  Fly  1202 SHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYER 1266
            :     ....|...:.:..:..:|||:|||........|..||:.|..|:..|||.:|.:|..|:
 Worm   263 T-----TGSPNSTFEKMTGQAGRKRKKRTSIEVNVKSRLEFHFQSNQKPNAQEITQVAMELQLEK 322

  Fly  1267 EVIRIWFCNKRQALK 1281
            ||:|:||||:||..|
 Worm   323 EVVRVWFCNRRQKEK 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:473999	32/94 (34%)
		Homeodomain	1226..1282	CDD:459649	26/56 (46%)
ceh-6	NP_492304.1	POU	188..261	CDD:197673	31/91 (34%)
		Homeodomain	282..338	CDD:459649	26/56 (46%)