Protein Alignment pdm3 and Pou2f1

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: NP_001094109.1
• Gene: Pou2f1 / 171068
• RGDID: 621689
• Length: 768
• Species: Rattus norvegicus
• Alignment Length: 566
• Identity: 137/566 - (24%)
• Similarity: 224/566 - (39%)
• Gaps: 148/566 - (26%)

  Fly   740 AADLRRSAERSPTAGSPTGG--SPGLAAKG----PQPPPPGAAFLLQQQLHIKPETQTHLHHHLQ 798
            |||.|.:........|...|  |.|....|    .||.|.|.|....|       .|..|.|..|
  Rat    19 AADSRMNNPSETNKSSMESGDASTGTQTNGLDFEKQPVPVGGAISTAQ-------AQAFLGHLHQ 76

  Fly   799 TQ----STSAVSSTLPQISLRHPDELTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGSSTVSP 859
            .|    |..|.:.:| .:..:..:|....|          .:|.|:..|      |::.:
  Rat    77 VQLAGTSLQAAAQSL-NVQSKSSEESGDSQ----------QSSQPSQQP------SVQSA----- 119

  Fly   860 KHSPQGRMGGSGGSTTTGMNLSQHHERHDRLERLERQERHERRSHTPTATATRASVSSSSSAGHH 924
              .||.::..:||. .||:.|:...::. .|::.:.|           |....|:|...|::..|
  Rat   120 --IPQTQLMLAGGQ-ITGLTLTPAQQQL-LLQQAQAQ-----------AQLLAAAVQQHSASQQH 169

  Fly   925 ---GGSLPSGRLSPPSSAPSNSAANSISDRGYTSPLFRTHSPQGHALSLGGSPRLERDYLGNGPS 986
               |.::.:...:|.:..|.:.......|      |.:....|...|:|       :.::...|:
  Rat   170 SAAGATISASAATPMTQIPLSQPIQIAQD------LQQLQQLQQQNLNL-------QQFVLVHPT 221

  Fly   987 SG--TATSTSSCGAPTAAGSSATANVLSSINRLNASN-----GELTITKSLGAPTATATRASSAS 1044
            :.  .|....|.......|.....|:|:.:.:.:.:|     ..:|:|..   || |.||..:|:
  Rat   222 TNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQPQPSITLTSQ---PT-TPTRTIAAT 282

  Fly  1045 PRDDSPGPGPSTSSVSHMQPLKLSPSSRSEPPHLSPNGNDNDNDLLMDSPN--EPTINQATTNVV 1107
                               |::..|.|::.|..:             |:|:  ||:
  Rat   283 -------------------PIQTLPQSQTTPKRI-------------DTPSLEEPS--------- 306

  Fly  1108 DGIDLDEIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQ 1172
               ||:|:::|||.||.||:.||.||..||.|:....|..:||:.|
  Rat   307 ---DLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI------------------- 349

  Fly  1173 NMFEKLDITPKSAQKIKPVLERWMKEAEESHWNRYKSGQNHL-TDYIGVEP-SKKRKRRTSFTPQ 1235
            :.||.|:::.|:..|:||:||:|:.:||....:...|..:.| :..:|.|. :::||:|||....
  Rat   350 SRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIETN 414

  Fly  1236 ALELLNAHFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALK 1281
            ....|...|..|..|:..:||.:|.||..|:||||:||||:||..|
  Rat   415 IRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEK 460

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	31/91 (34%)
		Homeobox	1228..1281	CDD:278475	23/52 (44%)
Pou2f1	NP_001094109.1	POU	303..377	CDD:197673	33/104 (32%)
		Homeobox	407..460	CDD:278475	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810