Protein Alignment pdm3 and vvl

DIOPT Version :10

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: XP_061500240.1
• Gene: vvl / 1276544
• VectorBaseID: AGAMI1_001511
• Length: 498
• Species: Anopheles gambiae
• Alignment Length: 487
• Identity: 123/487 - (25%)
• Similarity: 177/487 - (36%)
• Gaps: 119/487 - (24%)

  Fly   851 LRGSSTVSPKHSPQGRMGGSGGSTTTGMNLSQHHERHDR--LERLERQERHERRSHTPTATATRA 913
            :..::.:||.......:||.||....|.....||....|  .:..|.:..|....|....:|..|
Mosquito     1 MAATAYISPGAELDMALGGGGGGGNGGGGGGYHHTSSPRSAADANEMKYMHHHHHHHHHQSAAAA 65

  Fly   914 SVSSSSSAGHHGGSLPSGRLSPPSSAPSNSAANSI--------------------------SDRG 952
            :..::::..||    |.|...|.|.:|:.:...|:                          |...
Mosquito    66 AAVAAAATHHH----PGGLTVPSSPSPNPAGLGSVTGGLGATPWAALQPSDPWALHAAVAHSHPA 126

  Fly   953 YTSPLFRTH------------------SPQGHALSLGGSPRLERDYLGNGPSSGTATSTSSCGAP 999
            :|.|....|                  .|.|.....||.........|.|...|...|.....||
Mosquito   127 HTHPHAHPHPADVKQEMHLSQQARQQAGPGGGGGGGGGGGGGGGTGAGGGGGGGGMASPHGWHAP 191

  Fly  1000 TAAGSSATANVLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQP 1064
            ..||:.......|.:....|.||.|....|.....|....|::.:|
Mosquito   192 VHAGAHYATGTGSPLQYHAAMNGMLHHPASHHHHPAHHQSAAAGTP------------------- 237

  Fly  1065 LKLSPSSRSEPP--HLSPNGN--------DNDNDLLMDSPNEPTINQATTNVVDGIDLDEIKEFA 1119
             .|.||.|.|.|  ||.|:.:        ..|.|:.....:.||             .|:::.||
Mosquito   238 -SLHPSLRGESPQLHLPPHHHHHHHHHHLQGDRDVSAGEEDTPT-------------SDDLEAFA 288

  Fly  1120 KAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPKS 1184
            |.||.||:.||.||..||.||....|..:||:.||                   .||.|.::.|:
Mosquito   289 KQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTIC-------------------RFEALQLSFKN 334

  Fly  1185 AQKIKPVLERWMKEAEESHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNAHFERNTH 1249
            ..|:||:|::|::||:.:      :|.....|.|..: .:|||:|||........|..||.:...
Mosquito   335 MCKLKPLLQKWLEEADST------TGSPTSIDKIAAQ-GRKRKKRTSIEVSVKGALEQHFHKQPK 392

  Fly  1250 PSGTEITGLAHQLGYEREVIRIWFCNKRQALK 1281
            ||..||:.||..|..|:||:|:||||:||..|
Mosquito   393 PSAQEISTLADSLQLEKEVVRVWFCNRRQKEK 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:473999	31/91 (34%)
		Homeodomain	1226..1282	CDD:459649	26/56 (46%)
vvl	XP_061500240.1	None