Protein Alignment pdm3 and pou2f2a

DIOPT Version :10

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: XP_073787549.1
• Gene: pou2f2a / 100537384
• ZFINID: ZDB-GENE-060310-2
• Length: 721
• Species: Danio rerio
• Alignment Length: 861
• Identity: 183/861 - (21%)
• Similarity: 257/861 - (29%)
• Gaps: 389/861 - (45%)

  Fly   447 PATAAALASLQGLAASVFNSPLNL-SVGGEPVATTGPSVAPTSPTHNGGK--------------- 495
            |::.....:..|...:|...|::: ||..|.....|.:.........|||
Zfish     9 PSSGVPPLNNSGSLTNVALFPISIYSVVMETAKMLGTTRESERRRDGGGKKVSEGRAQIKVDIRM 73

  Fly   496 SKTAKGGSSGN----GSGGSSANSGTSSAQQQQQPDNP-SSSSSPHHPLSASSLANVLAAATASP 555
            ||..:....|.    .|..|..||..:|.|.|....:| ..|.:|.:.......|..:.:..|.|
Zfish    74 SKAMEDDKMGTELPVDSTDSERNSPEASDQTQPMKTSPFCLSPAPSNTKVKGEEAAEMTSVHAPP 138

  Fly   556 PPSLQAPPASAQMP--QLILASGQLVQGVQGAQLLIPTAQGIAVQTILTIPVSPQIPTTEQFLPN 618
            |     |||...:|  ||:||..||.    |...|:|.
Zfish   139 P-----PPAQPALPHTQLMLAGSQLA----GLAALLPA--------------------------- 167

  Fly   619 AFGAFASYQQQQQQQQQQRDLLPPSLAALQHATALPQLAQTPTNLLKPNLFSTGVQQLLTALHPE 683
                    |||...||.|..||   .||:|.:.|                        ..|.|
Zfish   168 --------QQQLLLQQAQAQLL---AAAVQQSNA------------------------AHAAH-- 195

  Fly   684 LFAAAAATHQQQQQQQQQQVQQQREREREREREREREREREREQHLGIGHLPHSHLAADLRRSAE 748
               ||||.:|||.|||..|...|.:.:
Zfish   196 ---AAAAANQQQSQQQANQAAAQAQSQ-------------------------------------- 219

  Fly   749 RSPTAGSPTGGSPGLAAKGPQPPPPGAAFLLQQQLHIKPETQTHLHHHLQTQSTSAVSSTLPQIS 813
                            ||..|.|||    ||.|.:.:   |...:...||.|..    ..:|...
Zfish   220 ----------------AKAEQAPPP----LLSQPIQL---TAQDIQQLLQLQQL----VLMPGHP 257

  Fly   814 LRHPDELTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGSSTVSPKHSPQGRMGGSGGSTTTGM 878
            |:.|.:...||...:..:....::|...|               .|:.||     ||..:|...:
Zfish   258 LQSPAQFLLPQAQAQQGQQGLLSTPNLIP---------------LPQQSP-----GSLLTTPPRL 302

  Fly   879 NLSQHHERHDRLERLERQERHERRSHTPTATATRASVSSSSSAGHHGGSLPSGRLSPPSSAPSNS 943
            .|...|...|||..|:|::..|             ||.||:                |||||..|
Zfish   303 GLQAQHHLDDRLWSLQREKSVE-------------SVVSSA----------------PSSAPPMS 338

  Fly   944 AANSISDRGYTSPLFRTHSPQGHALSLGGSPRLERDYLGNGPSSGTATSTSSCGAPTAAGSSATA 1008
            :
Zfish   339 S---------------------------------------------------------------- 339

  Fly  1009 NVLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQPLKLSPSSRS 1073
                                   |||.|
Zfish   340 -----------------------APTVT------------------------------------- 344

  Fly  1074 EPPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGIDLDEIKEFAKAFKLRRLSLGLTQTQVGQ 1138
              ||                |.||:            ||:|:::||:.||.||:.||.||..||.
Zfish   345 --PH----------------PEEPS------------DLEELEQFARTFKQRRIKLGFTQGDVGM 379

  Fly  1139 ALSVTEGPAYSQSAICSSALAAQMYAAQLSTQQQNMFEKLDITPKSAQKIKPVLERWMKEAEE-S 1202
            |:....|..:||:.|                   :.||.|:::.|:..|:||:||:|:.:||. :
Zfish   380 AMGKLYGNDFSQTTI-------------------SRFEALNLSFKNMCKLKPLLEKWLSDAETMA 425

  Fly  1203 HWNRYKSGQNHLTDYIGVE--PSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYE 1265
            ..|...|..:..:..:|.|  |.::||:|||........|..:|..|..|:..||..:|.||..|
Zfish   426 IDNMLPSPSSLSSPLLGFEGLPGRRRKKRTSIETNVRIALERNFISNQKPTSEEILLMAEQLNME 490

  Fly  1266 REVIRIWFCNKRQALK 1281
            :||||:||||:||..|
Zfish   491 KEVIRVWFCNRRQKEK 506

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:473999	30/91 (33%)
		Homeodomain	1226..1282	CDD:459649	26/56 (46%)
pou2f2a	XP_073787549.1	None