Protein Alignment pdm3 and pou4f1

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: XP_002931972.1
• Gene: pou4f1 / 100488759
• XenbaseID: XB-GENE-853139
• Length: 371
• Species: Xenopus tropicalis
• Alignment Length: 559
• Identity: 119/559 - (21%)
• Similarity: 176/559 - (31%)
• Gaps: 216/559 - (38%)

  Fly   735 PH--------SHLAADLRRSAERSPTAGSPTGGSPGLAAKGPQPPPPGAAFL-LQQQLHIKPETQ 790
            ||        .|....|..|:|....|..||            ||.....|. |.:.|..:.|
 Frog     9 PHFAMHPSLPEHKYTSLHSSSEAIRRACLPT------------PPMQSNIFASLDETLLARAE-- 59

  Fly   791 THLHHHLQTQSTSAVSSTLPQISLRHPDELTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGSS 855
                      :.:||...:.| ...||.:..|....:..::.|.::|.|..|..||
 Frog    60 ----------ALAAVDIAVSQ-GKSHPYKPDATYHTMNSVQCSNNSSVPLGPHHHH--------- 104

  Fly   856 TVSPKHSPQGRMGGSGGSTTTGMNLSQHHERHDRLERLERQERHERRSHTPTATATRASVSSSSS 920
                                     ..||..|..||..:..|.           ....|::..:|
 Frog   105 -------------------------HHHHHHHQALEPGDLLEH-----------VASPSLALMAS 133

  Fly   921 AGHHGGSLPSGRLSPPSSAPSNSAANSISDRGYTSPLFRTHSPQGHALSLGGSPRLERDYLGNGP 985
            .||.|                                            :||         |.|.
 Frog   134 TGHEG--------------------------------------------VGG---------GGGG 145

  Fly   986 SSGTATSTSSCGAPTAAGSSATANVLSSINRLNASNGELTITKSLGAPTATATRASSASPRDDSP 1050
            ..|.....||.|     ...:..:.||.::...|.|    :|.:|..|...|..          .
 Frog   146 GGGGGGLMSSPG-----HHHSHMHGLSHLSHQAAMN----MTSALQHPGLVAAH----------H 191

  Fly  1051 GPGPSTSSVSHMQPLKLSPSSRSEPPHLSPNGNDNDNDLLMDSPNEPTINQATTNVVDGIDLDEI 1115
            |||...:|..                     |.......:.||..:|.               |:
 Frog   192 GPGGQVASAV---------------------GAAAGLASICDSETDPR---------------EL 220

  Fly  1116 KEFAKAFKLRRLSLGLTQTQVGQALSVTEGP---AYSQSAICSSALAAQMYAAQLSTQQQNMFEK 1177
            :.||:.||.||:.||:||..||.||:..:.|   :.|||.||                   .||.
 Frog   221 EAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTIC-------------------RFES 266

  Fly  1178 LDITPKSAQKIKPVLERWMKEAEESHWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNA 1242
            |.::..:...:||:|:.|::|||.:  .|.|..:..|  :.|.|   |:::|||........|.|
 Frog   267 LTLSHNNMIALKPILQAWLEEAEGA--QREKLNKPEL--FNGGE---KKRKRTSIAAPEKRSLEA 324

  Fly  1243 HFERNTHPSGTEITGLAHQLGYEREVIRIWFCNKRQALK 1281
            :|.....||..:|..:|.:|..::.|:|:||||:||..|
 Frog   325 YFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 363

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	29/94 (31%)
		Homeobox	1228..1281	CDD:278475	19/52 (37%)
pou4f1	XP_002931972.1	POU	212..289	CDD:197673	32/110 (29%)
		Homeobox	310..364	CDD:365835	20/54 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910