Protein Alignment pdm3 and pou6f2

DIOPT Version :9

• Sequence 1: NP_001188885.2
• Gene: pdm3 / 35813
• FlyBaseID: FBgn0261588
• Length: 1292
• Species: Drosophila melanogaster
• Sequence 2: XP_021325963.1
• Gene: pou6f2 / 100001518
• ZFINID: ZDB-GENE-091118-71
• Length: 719
• Species: Danio rerio
• Alignment Length: 872
• Identity: 279/872 - (31%)
• Similarity: 361/872 - (41%)
• Gaps: 302/872 - (34%)

  Fly   501 GGSSGNGSGGSSANSGTSSAQQQQQPDNPSSSSSPHHPLSASSLANVLAAATASPPPSLQAP--- 562
            ||..|:....:|::........|..|..|   ..|...|.|..||:.::...:...|.|..|
Zfish    54 GGRVGSVQSDASSSPTEHGHMGQSHPTYP---VGPQSLLVAQQLASAVSGVMSGGAPGLNQPILI 115

  Fly   563 PASAQMPQLILASGQLVQGVQGAQLLIPTA---QGI----AVQTILTIPVSPQIPTTEQFLPNAF 620
            |.:|         |..:.|.||..|.:|||   ||:    |...|:.:|           |.| .
Zfish   116 PFNA---------GGHLGGQQGLVLSLPTAANIQGLVAAAAAGGIMALP-----------LQN-L 159

  Fly   621 GAFASYQQQQQQQQQQRDLLPPSLAALQHATALPQLAQTPTNLLKPNLFSTGVQQLLTALHPELF 685
            .|.:|...|.|..||        |..|||
Zfish   160 QATSSLNSQLQHLQQ--------LQQLQH------------------------------------ 180

  Fly   686 AAAAATHQQQQ----QQQQQQVQQQRERERERERE------REREREREREQHLGIGHLPHSHLA 740
                  |||||    ||||||.|::||||||||||      |||:::||||||
Zfish   181 ------HQQQQHHHHQQQQQQQQREREREREREREQREREQRERDQQREREQH------------ 227

  Fly   741 ADLRRSAERSPTAGSPTGGSPGLAAKGPQPPPPGAAFLLQQ---QLHIKPETQTHLHHHLQTQST 802
                                                   ||   |.|::|.:    ||.|.....
Zfish   228 ---------------------------------------QQLCGQAHLQPPS----HHQLTPPIQ 249

  Fly   803 SAVSSTLPQISLRHPDELTAPQMDLKPLELSASTSPPAPPPRHHFGHSLRGS--STVSPKHSPQG 865
            |.||...|           .|.....|...| |..||..||.|....|...|  |.|:|....||
Zfish   250 SQVSGPSP-----------GPVPTCPPSNHS-SAQPPQSPPSHRQNQSPARSLPSPVTPPLPLQG 302

  Fly   866 RMGGSGGSTTTGMNLSQHHERHDRLERLERQERHERRSHTPT----ATATRASVSSSSSAGHHGG 926
                           :..|     |.|....|...:|...|:    ..|::|:|:::::.|...|
Zfish   303 ---------------NAFH-----LLRQRESEGERKRECLPSDRLNPLASQAAVAAAAAMGSIAG 347

  Fly   927 SLPSGR-------------------------LSPPSSAPSNSAANSISDRGYTSPL-FRTHSPQG 965
            |...|.                         |.|.|..|||.:.      |.|||| .:..:||
Zfish   348 SQVFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNSVGPSNQSG------GGTSPLQVQPITPQ- 405

  Fly   966 HALSLGGSPRLERDYLGNG--PSSGTATSTSSCGAP----TAAGSSATANVLSSINRLNASNGEL 1024
              |......::....:||.  |...|...|.|...|    ...|.:..|..:|..|.|...:.:
Zfish   406 --LLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLPQTGQTPQAPPVSQPNLLRMPHSQ- 467

  Fly  1025 TITKSLGAPTATATRASSASPRDDSPGPGPSTSSVSHMQPLKLSPSSRSEPPHLSPNGNDNDNDL 1089
                   :|...|:.:||.|         .|:||...:..|..:|.:
Zfish   468 -------SPLRQASSSSSTS---------SSSSSALSVGQLVSNPQT------------------ 498

  Fly  1090 LMDSPNEPTINQATTNVVDGIDLDEIKEFAKAFKLRRLSLGLTQTQVGQALSVTEGPAYSQSAIC 1154
               :|:|          |||::|:||:|||||||:|||||||||||||||||.||||||||||||
Zfish   499 ---APSE----------VDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAIC 550

  Fly  1155 SSALAAQMYAAQLSTQQQNM-----------------FEKLDITPKSAQKIKPVLERWMKEAEES 1202
            ...:....:......|:..:                 ||||||||||||||||||||||.|||.
Zfish   551 RHTILRSHFFLPQEAQENTIASSLTGKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEA- 614

  Fly  1203 HWNRYKSGQNHLTDYIGVEPSKKRKRRTSFTPQALELLNAHFERNTHPSGTEITGLAHQLGYERE 1267
               |::||..:||::||.||||||||||||||||||:||:|||:||||||.|:|.:|.:|.|:||
Zfish   615 ---RHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDRE 676

  Fly  1268 VIRIWFCNKRQALKNTVRMMS--KGMV 1292
            |:|:||||||||||||::.:.  :|:|
Zfish   677 VVRVWFCNKRQALKNTIKRLKQPEGLV 703

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pdm3	NP_001188885.2	Pou	1108..1200	CDD:304656	65/108 (60%)
		Homeobox	1228..1281	CDD:278475	39/52 (75%)
pou6f2	XP_021325963.1	E3_binding	<238..>308	CDD:332172	25/105 (24%)
		Pou	504..613	CDD:328965	65/108 (60%)
		Homeobox	637..690	CDD:306543	39/52 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	100	1.000	Domainoid score	I6979
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	317	1.000	Inparanoid score	I2519
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004074
OrthoInspector	1	1.000	-	-		otm26207
orthoMCL	1	0.900	-	-		OOG6_109259
Panther	1	1.100	-	-	LDO	PTHR11636
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X5977
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	8	8.050