DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30371 and C1r

DIOPT Version :9

Sequence 1:NP_610370.1 Gene:CG30371 / 35806 FlyBaseID:FBgn0050371 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001128027.1 Gene:C1r / 312705 RGDID:1309091 Length:707 Species:Rattus norvegicus


Alignment Length:542 Identity:129/542 - (23%)
Similarity:193/542 - (35%) Gaps:198/542 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 CDNTFNLSPGTTYVESPYYPNNYPGGTSCRY------------KFTAP--LDYYIQVQC---SLG 71
            |.:.....| :.|:.|..||..||....|.|            ||..|  :|.:.||.|   .|.
  Rat   193 CSSGLYTEP-SGYISSLEYPKPYPPDLRCNYSIRVERGLTVHLKFLDPFEIDDHQQVHCPYDQLQ 256

  Fly    72 IPKGNGQ-----CTTDN--------------FWLDTEGD-------------------------- 91
            | ..||:     |.|..              |:.|..||                          
  Rat   257 I-YANGKNLGEFCGTQRPPDLDTSSNAVDLLFFTDESGDSRGWKLRYTTEIIKCPQPKALDEFTI 320

  Fly    92 ----------------------LLMRGAENF------------------------CGS-GTLSRE 109
                                  .||.|::..                        ||. .:||..
  Rat   321 IQDPQPQYQFRDYFIVTCKQGYQLMEGSQALLSFTAVCQHDGTWHRAMPRCKIKDCGQPRSLSNG 385

  Fly   110 SLFTELVFAYISTG---------------------TKGGS-------FKCTLTTVKQN------- 139
            .      |.|::|.                     |:.||       :.||...:.:|       
  Rat   386 D------FRYLTTRGVNTYEARIQYYCHDPYYKMMTRAGSSESVRGIYTCTPQGIWKNEEEGEKM 444

  Fly   140 --C--NCG-----WSATTRIANGQQAAANEFPSMAALKDVTKNQASFCGGTIVAHRYILTAAHCI 195
              |  .||     .:...||..||:|....||..|     ..|.....||.::..|:||||||.|
  Rat   445 PRCLPVCGKPVNPVTQKQRIIGGQKANPGNFPWQA-----FTNIHGRGGGALLGDRWILTAAHTI 504

  Fly   196 Y-QVSRATNIVAIVGTNDLG--NPSSSRYYQQYNIQQMIPHEQYVSDPDVNN---DIAVLITASN 254
            | :.....|.|.:.....||  |....:....:.::::|.|..|..| :.||   |||:|...::
  Rat   505 YPKEHNKENNVNVSKDVFLGHTNVEEIKKLGHHPVRRVIIHPDYRQD-EPNNFEGDIALLELENS 568

  Fly   255 IQWSRGVGPICLPPVGTSTPFTYDLVDVIGYGTVFFAGPT----STSLQKINLNVVTNQDCQ--- 312
            :.....:.|||||...|    .|| .|::||.:.|  |.|    :.:|:.:.|.:...:.||   
  Rat   569 VTLGPNLLPICLPDNET----FYD-KDLMGYVSGF--GITEDKIAFNLRFVRLPIADREACQRWL 626

  Fly   313 -TEYNNVATIYTGQM-CTYDYSGTGRDSCQFDSGGPVILR-KSRQFLV--GIISYGKSCAESQYP 372
             |:.:|  .:::..| |:.|.: ...|:||.||||...:| :||...|  ||:|:|..|.|.   
  Rat   627 RTKNSN--DVFSQNMFCSGDPT-LKHDACQGDSGGVFAVRDRSRDIWVATGIVSWGIGCGEG--- 685

  Fly   373 MGVNTRITSYISWIRQKIGNSN 394
            .|..|::.:|:.||:::||:.|
  Rat   686 YGFYTKLLNYVDWIKKEIGDEN 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30371NP_610370.1 CUB 24..>67 CDD:294042 15/56 (27%)
Tryp_SPc 149..386 CDD:214473 78/254 (31%)
Tryp_SPc 150..389 CDD:238113 79/256 (31%)
C1rNP_001128027.1 CUB 27..138 CDD:214483
FXa_inhibition 161..189 CDD:291342
CUB 195..302 CDD:278839 26/108 (24%)
Sushi 309..371 CDD:278512 3/61 (5%)
Sushi 376..447 CDD:278512 13/76 (17%)
Tryp_SPc 463..699 CDD:214473 78/254 (31%)
Tryp_SPc 464..701 CDD:238113 79/255 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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