DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30371 and svh-1

DIOPT Version :10

Sequence 1:NP_610370.1 Gene:CG30371 / 35806 FlyBaseID:FBgn0050371 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:379 Identity:104/379 - (27%)
Similarity:160/379 - (42%) Gaps:74/379 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QVQCSLGIPKGNGQCTTDNFWL----DTEG--DLLMRGA-ENFCG---SGTLSR---------ES 110
            |:.|..|  :....|..::|.|    ||.|  ::|.|.. |..|.   :|.:|.         |.
 Worm   581 QIDCQSG--EDEDYCRANSFRLTNGSDTSGYLEVLFRSRWEPICADHLNGKISNSICDAMRLGEH 643

  Fly   111 LFTELVFAYISTGTKGG---------SFKCT----LTTVKQN-----CNCGW------------S 145
            .|.....|.||:|....         |..||    ::.:.||     ..||.            |
 Worm   644 GFILSTNATISSGYNVNCDVDCSIRRSSSCTRHARISCISQNGMSSASQCGLRYVEVNARDAAKS 708

  Fly   146 ATTRIANGQQAAANEFPSMAALKD-VTKNQASFCGGTIVAHRYILTAAHCIYQVSRATNIVAIVG 209
            ...|:..|.:.....||..|||:: .||  |..||.:|:...:::|||||..:..|.::...:||
 Worm   709 RIARVVGGFETVPGAFPWTAALRNKATK--AHHCGASILDKTHLITAAHCFEEDERVSSYEVVVG 771

  Fly   210 TNDLGNPSSSRYYQQYNIQQMIPHEQYVSDPDV-NNDIAVL-ITASNIQWSRGVGPICLPPVGTS 272
              |..|..:....|.:.:|::..:..|   .|: ::|||:| |....|:::....|||||    |
 Worm   772 --DWDNNQTDGNEQIFYLQRIHFYPLY---KDIFSHDIAILEIPYPGIEFNEYAQPICLP----S 827

  Fly   273 TPFTYD---LVDVIGYGTVFFAGPTSTSLQKINLNVVTNQDCQTEYNNVATIYTGQMCTYDYSGT 334
            ..|.|.   ...|.|:|::...  .:..||...:.::...||.......:::.....|. .|...
 Worm   828 KDFVYTPGRQCVVSGWGSMGLR--YAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCA-GYLEG 889

  Fly   335 GRDSCQFDSGGPVILRK--SRQFLVGIISYGKSCAESQYPMGVNTRITSYISWI 386
            |.||||.|||||...|:  ....|.|:||:|..||:.:.| |:.|.:..|:|||
 Worm   890 GIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQP-GIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30371NP_610370.1 CUB 24..>67 CDD:412131 1/1 (100%)
Tryp_SPc 149..386 CDD:214473 73/244 (30%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566 3/10 (30%)
SR 599..681 CDD:214555 19/81 (23%)
Tryp_SPc 713..945 CDD:238113 74/245 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.