DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30371 and svh-1

DIOPT Version :9

Sequence 1:NP_610370.1 Gene:CG30371 / 35806 FlyBaseID:FBgn0050371 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:379 Identity:104/379 - (27%)
Similarity:160/379 - (42%) Gaps:74/379 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QVQCSLGIPKGNGQCTTDNFWL----DTEG--DLLMRGA-ENFCG---SGTLSR---------ES 110
            |:.|..|  :....|..::|.|    ||.|  ::|.|.. |..|.   :|.:|.         |.
 Worm   581 QIDCQSG--EDEDYCRANSFRLTNGSDTSGYLEVLFRSRWEPICADHLNGKISNSICDAMRLGEH 643

  Fly   111 LFTELVFAYISTGTKGG---------SFKCT----LTTVKQN-----CNCGW------------S 145
            .|.....|.||:|....         |..||    ::.:.||     ..||.            |
 Worm   644 GFILSTNATISSGYNVNCDVDCSIRRSSSCTRHARISCISQNGMSSASQCGLRYVEVNARDAAKS 708

  Fly   146 ATTRIANGQQAAANEFPSMAALKD-VTKNQASFCGGTIVAHRYILTAAHCIYQVSRATNIVAIVG 209
            ...|:..|.:.....||..|||:: .||  |..||.:|:...:::|||||..:..|.::...:||
 Worm   709 RIARVVGGFETVPGAFPWTAALRNKATK--AHHCGASILDKTHLITAAHCFEEDERVSSYEVVVG 771

  Fly   210 TNDLGNPSSSRYYQQYNIQQMIPHEQYVSDPDV-NNDIAVL-ITASNIQWSRGVGPICLPPVGTS 272
              |..|..:....|.:.:|::..:..|   .|: ::|||:| |....|:::....|||||    |
 Worm   772 --DWDNNQTDGNEQIFYLQRIHFYPLY---KDIFSHDIAILEIPYPGIEFNEYAQPICLP----S 827

  Fly   273 TPFTYD---LVDVIGYGTVFFAGPTSTSLQKINLNVVTNQDCQTEYNNVATIYTGQMCTYDYSGT 334
            ..|.|.   ...|.|:|::...  .:..||...:.::...||.......:::.....|. .|...
 Worm   828 KDFVYTPGRQCVVSGWGSMGLR--YAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCA-GYLEG 889

  Fly   335 GRDSCQFDSGGPVILRK--SRQFLVGIISYGKSCAESQYPMGVNTRITSYISWI 386
            |.||||.|||||...|:  ....|.|:||:|..||:.:.| |:.|.:..|:|||
 Worm   890 GIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQP-GIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30371NP_610370.1 CUB 24..>67 CDD:294042 1/1 (100%)
Tryp_SPc 149..386 CDD:214473 73/244 (30%)
Tryp_SPc 150..389 CDD:238113 74/245 (30%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566 3/10 (30%)
SRCR_2 599..681 CDD:382996 19/81 (23%)
Tryp_SPc 713..945 CDD:238113 74/245 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24258
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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