DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30371 and TMPRSS6

DIOPT Version :9

Sequence 1:NP_610370.1 Gene:CG30371 / 35806 FlyBaseID:FBgn0050371 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001275929.1 Gene:TMPRSS6 / 164656 HGNCID:16517 Length:824 Species:Homo sapiens


Alignment Length:542 Identity:117/542 - (21%)
Similarity:191/542 - (35%) Gaps:193/542 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FAPTVLA----YFEGCDNTFNL-----SPGTTYVESPYYPNNYPGGTSCRYKFTAP-LDYYI--- 64
            :.|.||:    .|:.|:....|     |.|.  :.:||:|:.|...|.|.:..|.| |||.:   
Human   311 YDPFVLSVQPVVFQACEVNLTLDNRLDSQGV--LSTPYFPSYYSPQTHCSWHLTVPSLDYGLALW 373

  Fly    65 -----------QVQCSLG----------------------------------------------- 71
                       .:.|:.|                                               
Human   374 FDAYALRRQKYDLPCTQGQWTIQNRRLCGLRILQPYAERIPVVATAGITINFTSQISLTGPGVRV 438

  Fly    72 -----------------------IPKGNG-------------------QCTTDNFWL------DT 88
                                   :|..:|                   ||..|:..:      |.
Human   439 HYGLYNQSDPCPGEFLCSVNGLCVPACDGVKDCPNGLDERNCVCRATFQCKEDSTCISLPKVCDG 503

  Fly    89 EGDLLMRGAENFCGSGTLSRESLFTELVFAYISTGTKGGSFKC-TLTTVK--------------- 137
            :.|.|....|..|..|               :..||  .:|:| ..:.||               
Human   504 QPDCLNGSDEEQCQEG---------------VPCGT--FTFQCEDRSCVKKPNPQCDGRPDCRDG 551

  Fly   138 ---QNCNCGWSA-TTRIANGQQAAANEFPSMAALKDVTKNQASFCGGTIVAHRYILTAAHCIYQV 198
               ::|:||... ::||..|..::..|:|..|:|:...::   .|||.::|.|:::|||||..:.
Human   552 SDEEHCDCGLQGPSSRIVGGAVSSEGEWPWQASLQVRGRH---ICGGALIADRWVITAAHCFQED 613

  Fly   199 SRATNIVAIVGTNDLGNPSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRGVGP 263
            |.|:.::..|....:...|.......:.:.:::.|..:..|.. :.|:|:|.....:..|..|.|
Human   614 SMASTVLWTVFLGKVWQNSRWPGEVSFKVSRLLLHPYHEEDSH-DYDVALLQLDHPVVRSAAVRP 677

  Fly   264 ICLPPVGTSTPFTYDL-VDVIGYGTV-----------FFAG-----------PTSTSLQKINLNV 305
            :|||  ..|..|...| ..:.|:|.:           .|.|           |.|.:|||:::.:
Human   678 VCLP--ARSHFFEPGLHCWITGWGALREGALRADAVALFYGWRNQGSETCCCPISNALQKVDVQL 740

  Fly   306 VTNQDCQTEYNNVATIYTGQMCTYDYSGTGRDSCQFDSGGPVILR--KSRQFLVGIISYGKSCAE 368
            :....|...|....   |.:|....|....:|:||.|||||::.:  ..|.||.|::|:|..|..
Human   741 IPQDLCSEVYRYQV---TPRMLCAGYRKGKKDACQGDSGGPLVCKALSGRWFLAGLVSWGLGCGR 802

  Fly   369 SQYPMGVNTRITSYISWIRQKI 390
            ..| .||.||||..||||:|.:
Human   803 PNY-FGVYTRITGVISWIQQVV 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30371NP_610370.1 CUB 24..>67 CDD:294042 15/62 (24%)
Tryp_SPc 149..386 CDD:214473 73/261 (28%)
Tryp_SPc 150..389 CDD:238113 74/263 (28%)
TMPRSS6NP_001275929.1 SEA 77..177 CDD:307516
CUB 326..440 CDD:238001 17/115 (15%)
LDLa 450..480 CDD:238060 2/29 (7%)
LDLa 486..516 CDD:238060 7/29 (24%)
Ldl_recept_a 520..557 CDD:278486 6/38 (16%)
Tryp_SPc 568..822 CDD:238113 74/263 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I4403
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

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