DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14760 and TMPRSS6

DIOPT Version :9

Sequence 1:NP_610366.1 Gene:CG14760 / 35802 FlyBaseID:FBgn0033277 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001275929.1 Gene:TMPRSS6 / 164656 HGNCID:16517 Length:824 Species:Homo sapiens


Alignment Length:566 Identity:125/566 - (22%)
Similarity:205/566 - (36%) Gaps:135/566 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IFEQCNHQVKLQSGQKL----LINSPYYPALYPVGTSCRYAVEAPK-DHVLQFKCE-LQLRTLST 77
            :|:.|  :|.|....:|    ::::||:|:.|...|.|.:.:..|. |:.|....: ..||....
Human   322 VFQAC--EVNLTLDNRLDSQGVLSTPYFPSYYSPQTHCSWHLTVPSLDYGLALWFDAYALRRQKY 384

  Fly    78 DLKCRTEVFHFNSEGDEVLTSSEYFCGSGKFERKSFLNRAVISYISSGHSEPPSAVKLKDKLHAV 142
            ||.|        ::|...: .:...||.          |.:..|              .:::..|
Human   385 DLPC--------TQGQWTI-QNRRLCGL----------RILQPY--------------AERIPVV 416

  Fly   143 PTTSTTTEAPQAVSIEEQDAEEEQ--EEEEEPEEADEDLSDEVLHVLQDVGVSD---ALAYVASL 202
            .|...|......:|:.........  ..:.:|...:...|...|.|....||.|   .|.....:
Human   417 ATAGITINFTSQISLTGPGVRVHYGLYNQSDPCPGEFLCSVNGLCVPACDGVKDCPNGLDERNCV 481

  Fly   203 LYDVEESRKSSTTIYLDKL----P--IRSSSKTSAKRARIVSSYP--------TAAPSPGHGGGR 253
            .....:.::.||.|.|.|:    |  :..|.:...:......::.        ...|:| ...||
Human   482 CRATFQCKEDSTCISLPKVCDGQPDCLNGSDEEQCQEGVPCGTFTFQCEDRSCVKKPNP-QCDGR 545

  Fly   254 FSCLVEAFQPTCSCGW----SRIPRIASPTNEEAVLHEFPPMAGVLTKKHGKVFCGAAIIHHRYL 314
            ..|...:.:..|.||.    |||  :....:.|.   |:|..|.:..:  |:..||.|:|..|::
Human   546 PDCRDGSDEEHCDCGLQGPSSRI--VGGAVSSEG---EWPWQASLQVR--GRHICGGALIADRWV 603

  Fly   315 LSAAHCFLGPETNSAAKLRVVVGEHDLASSFETFATQR------YDLDALILHEDFSQASGQPKN 373
            ::|||||......|.....|.:|        :.:...|      :.:..|:||....:.|..  .
Human   604 ITAAHCFQEDSMASTVLWTVFLG--------KVWQNSRWPGEVSFKVSRLLLHPYHEEDSHD--Y 658

  Fly   374 DIAMLKTRMAIVWSQHVGPACLP-----LQPGEDGQKLPLAGHQVVAAGWGTTSYGG-------- 425
            |:|:|:....:|.|..|.|.|||     .:||.         |..: .|||....|.        
Human   659 DVALLQLDHPVVRSAAVRPVCLPARSHFFEPGL---------HCWI-TGWGALREGALRADAVAL 713

  Fly   426 --------------PQTHRLLKATLDVIDGRRCRQALSSAGGLPPHTFCT-YTPG-RDTCQYDSG 474
                          |.::.|.|..:.:|....|.:.....  :.|...|. |..| :|.||.|||
Human   714 FYGWRNQGSETCCCPISNALQKVDVQLIPQDLCSEVYRYQ--VTPRMLCAGYRKGKKDACQGDSG 776

  Fly   475 GALY-ERINGRLMAVGIVSFGQACAAQQPS---VNTRVASFIKWIR 516
            |.|. :.::||....|:||:|..|.  :|:   |.||:...|.||:
Human   777 GPLVCKALSGRWFLAGLVSWGLGCG--RPNYFGVYTRITGVISWIQ 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14760NP_610366.1 CUB 37..126 CDD:294042 19/90 (21%)
Tryp_SPc 281..516 CDD:238113 70/273 (26%)
Tryp_SPc 281..515 CDD:214473 69/272 (25%)
TMPRSS6NP_001275929.1 SEA 77..177 CDD:307516
CUB 326..440 CDD:238001 27/148 (18%)
LDLa 450..480 CDD:238060 7/29 (24%)
LDLa 486..516 CDD:238060 7/29 (24%)
Ldl_recept_a 520..557 CDD:278486 5/37 (14%)
Tryp_SPc 568..822 CDD:238113 72/284 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I4403
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.