DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnut and SHS1

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_010056.1 Gene:SHS1 / 851373 SGDID:S000002384 Length:551 Species:Saccharomyces cerevisiae


Alignment Length:537 Identity:134/537 - (24%)
Similarity:235/537 - (43%) Gaps:159/537 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 PNQVYR--KAVKRGFEFTLMVVGASGLGKSTLINSMFLSDIY---------NAEQYPGPSLRKKK 182
            |..::|  |..|||..:|:::.|.:|.||:...|::..:.|:         ||.....|.::   
Yeast     8 PINLFRRKKEHKRGITYTMLLCGPAGTGKTAFANNLLETKIFPHKYQYGKSNASISSNPEVK--- 69

  Fly   183 TVAVEATKVM-----------------LKEN---GVNLTLT------------------------ 203
              .:..|||:                 ::.|   |:.:|.|                        
Yeast    70 --VIAPTKVVSFNSKNGIPSYVSEFDPMRANLEPGITITSTSLELGGNKDQGKPEMNEDDTVFFN 132

  Fly   204 VVDTPGFGDAVDNSNCWVPILEYVDSKYEEYLTAESRVYRK-TISDSRVHCCLYFIAPSGHGLLP 267
            ::.|.|.|:.:|:|.|...::.|::.:::..|..|:|:.|. ...|:|||..||||.|:||||..
Yeast   133 LIMTHGIGENLDDSLCSEEVMSYLEQQFDIVLAEETRIKRNPRFEDTRVHVALYFIEPTGHGLRE 197

  Fly   268 LDIACMQSLSDKVNLVPVIAKADTMTPDEVHLFKKQILNEIAQHKIKIYDFPATLE-DAAEEAKT 331
            :|:..|:|:|...|::|:|.:||:.|.:|:..|:|.|:.::.::.:.||.|....| |..|..:.
Yeast   198 VDVELMKSISKYTNVLPIITRADSFTKEELTQFRKNIMFDVERYNVPIYKFEVDPEDDDLESMEE 262

  Fly   332 TQNLRSRVPFAVVGANTIIEQDGKKVRGRRYPWGLVEVENLTHCDFIALRNMVIRTHLQDLKDVT 396
            .|.|.|..|||::.::| .:.:|:.|  |.||||::.:::....|...|:|::..:|||:.||.|
Yeast   263 NQALASLQPFAIITSDT-RDSEGRYV--REYPWGIISIDDDKISDLKVLKNVLFGSHLQEFKDTT 324

  Fly   397 NNVHYENYRCRKLSEL-----------------------------GLVDGKARLSNK-------- 424
            .|:.|||||..|||.:                             |..:....|:|.        
Yeast   325 QNLLYENYRSEKLSSVANAEEIGPNSTKRQSNAPSLSNFASLISTGQFNSSQTLANNLRADTPRN 389

  Fly   425 --------------------------NPLTQMEEE-KREHEQKMKKMEAEMEQVF----DMKVKE 458
                                      :|:.|:..| |:|:|..::.::.|....|    |:..:.
Yeast   390 QVSGNFKENEYEDNGEHDSAENEQEMSPVRQLGREIKQENENLIRSIKTESSPKFLNSPDLPERT 454

  Fly   459 KMQKLRDS-------ELELARRHE----ERKKALELQ--IRELEEKRREFE-REKKEWEDVNHVT 509
            |::.:.::       |..|||:.:    |.:.|.|||  |:|||.|..|.: |||.         
Yeast   455 KLRNISETVPYVLRHERILARQQKLEELEAQSAKELQKRIQELERKAHELKLREKL--------- 510

  Fly   510 LEELKRRSLGANSSTDN 526
               :.:..|..:||:.|
Yeast   511 ---INQNKLNGSSSSIN 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 118/488 (24%)
Septin 139..411 CDD:279124 94/326 (29%)
SHS1NP_010056.1 CDC3 1..519 CDD:227352 131/530 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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