DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnut and CDC3

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_013418.2 Gene:CDC3 / 851024 SGDID:S000004306 Length:520 Species:Saccharomyces cerevisiae


Alignment Length:497 Identity:185/497 - (37%)
Similarity:294/497 - (59%) Gaps:65/497 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GASNGDSNKLTHDLQEKE------------HQQAQK----PQKPPLPVRQKPMEIAGYVGFANLP 129
            |..|.||.:.  :..|.:            ..|::|    |.:|.:...::  :|.|||||||||
Yeast    46 GTQNDDSERF--EAAESDVKVEPGLGMGITSSQSEKGQVLPDQPEIKFIRR--QINGYVGFANLP 106

  Fly   130 NQVYRKAVKRGFEFTLMVVGASGLGKSTLINSMFLSDIYNA---------------------EQY 173
            .|.:|:::|.||.|.|:.||..|:||:||:.::|.:|...|                     |.:
Yeast   107 KQWHRRSIKNGFSFNLLCVGPDGIGKTTLMKTLFNNDDIEANLVKDYEEELANDQEEEEGQGEGH 171

  Fly   174 PGPSLRKKKTVAVEATKVMLKENGVNLTLTVVDTPGFGDAVDN-SNCWVPILEYVDSKYEEYLTA 237
            ...|..::..|.:::.:.:::||||.|.|.|:||.||||.::| ...|.||::.:||::::||.|
Yeast   172 ENQSQEQRHKVKIKSYESVIEENGVKLNLNVIDTEGFGDFLNNDQKSWDPIIKEIDSRFDQYLDA 236

  Fly   238 ESRVYRKTISDSRVHCCLYFIAPSGHGLLPLDIACMQSLSDKVNLVPVIAKADTMTPDEVHLFKK 302
            |:::.|.:|:|.|:|.|||||.|:||.|.|||:..|||:.:|.||:|||||:|.:|.:|:..|||
Yeast   237 ENKINRHSINDKRIHACLYFIEPTGHYLKPLDLKFMQSVYEKCNLIPVIAKSDILTDEEILSFKK 301

  Fly   303 QILNEIAQHKIKIYDFPATLEDAAEEAKTTQNLRSRVPFAVVGANTIIEQ-DGKKVRGRRYPWGL 366
            .|:|::.|..|:::..|....|.||.:..::.|.|.:|:||:|:|.|:|. .|.:||||.||||:
Yeast   302 TIMNQLIQSNIELFKPPIYSNDDAENSHLSERLFSSLPYAVIGSNDIVENYSGNQVRGRSYPWGV 366

  Fly   367 VEVENLTHCDFIALRNMVIRTHLQDLKDVTNNVHYENYRCRKLSELGLVDGKARLSNKNPLTQME 431
            :||:|..|.||..|:|::|:..:::||:.|:.:.|||||..||::||:....:.....:|:::.:
Yeast   367 IEVDNDNHSDFNLLKNLLIKQFMEELKERTSKILYENYRSSKLAKLGIKQDNSVFKEFDPISKQQ 431

  Fly   432 EEKREHEQKMKKMEAEMEQVFDMKVKEKMQKLRDSELELARRHEERKKALELQIRELEEKRREFE 496
            |||..||.|:.|:|.||:.||..||.||.:||:.||.||..||:|.|:.|..|::.||:|:::.|
Yeast   432 EEKTLHEAKLAKLEIEMKTVFQQKVSEKEKKLQKSETELFARHKEMKEKLTKQLKALEDKKKQLE 496

  Fly   497 REKKEWEDVNHVTLEELKRRSLGANSSTDNVD-GKKEKKKKG 537
                                 |..||::.||: .....||||
Yeast   497 ---------------------LSINSASPNVNHSPVPTKKKG 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 160/383 (42%)
Septin 139..411 CDD:279124 119/294 (40%)
CDC3NP_013418.2 CDC3 97..503 CDD:227352 169/426 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345629
Domainoid 1 1.000 247 1.000 Domainoid score I355
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1354
Inparanoid 1 1.050 341 1.000 Inparanoid score I412
Isobase 1 0.950 - 0 Normalized mean entropy S765
OMA 1 1.010 - - QHG51878
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 1 1.000 - - otm46632
orthoMCL 1 0.900 - - OOG6_104146
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2060
SonicParanoid 1 1.000 - - X204
TreeFam 1 0.960 - -
1615.740

Return to query results.
Submit another query.