DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnut and TOC132

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001324729.1 Gene:TOC132 / 816165 AraportID:AT2G16640 Length:1206 Species:Arabidopsis thaliana


Alignment Length:630 Identity:131/630 - (20%)
Similarity:219/630 - (34%) Gaps:185/630 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNSPRSNAVNGGSGGAISALPSTLAQLALRDKQQAAS-------------------ASASSATNG 46
            :.|.....|...:||.....|....:|   :|||::.                   .|:.|.|..
plant   379 VTSREHKPVQSANGGHDVQSPQPNKEL---EKQQSSRVHVDPEITENSHVETEPEVVSSVSPTES 440

  Fly    47 SSGSESL-----VGVGGRPPNQPPSVPVAASGKLDTSGGGASN-----GDSNKLTHDLQEKEHQQ 101
            .|...:|     .|:|...|...|:.......::  :|.|:.|     .||.....|    ||.:
plant   441 RSNPAALPPARPAGLGRASPLLEPASRAPQQSRV--NGNGSHNQFQQAEDSTTTEAD----EHDE 499

  Fly   102 AQKPQKPPLPVRQKPMEIAGYVGFANLPNQV------YRKAVK---RG----------------- 140
            .:  :|..| :|.|.:.:|..:|  ..|:.|      ||..:.   ||                 
plant   500 TR--EKLQL-IRVKFLRLAHRLG--QTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAM 559

  Fly   141 -------------FEFTLMVVGASGLGKSTLINSMFLSDIYNAEQYPGPSLRKKKTVAVEATKVM 192
                         |..|:||:|.||:|||..|||:|....:..:.:   .:..|:...||.....
plant   560 AEQLEAAGQDPLDFSCTIMVLGKSGVGKSATINSIFDEVKFCTDAF---QMGTKRVQDVEGLVQG 621

  Fly   193 LKENGVNLTLTVVDTPG----FGDAVDNSNCWVPILEYVDSK------YEEYLTAESRVYRKTIS 247
            :|       :.|:||||    :.|...|......:..::...      |.:.|..:||       
plant   622 IK-------VRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSR------- 672

  Fly   248 DSRVHCCLYFIAPSGHGLLPLDIACMQSLSDK------VNLVPVIAKADTMTPDEVHLFKKQILN 306
            ||              |.:||    ::::||.      .|.:..:..|.::.||..        |
plant   673 DS--------------GDMPL----LRTISDVFGPSIWFNAIVGLTHAASVPPDGP--------N 711

  Fly   307 EIAQHKIKIYDFPAT-----LEDAAEEAKTTQNLRSRVPFAVVGANTIIEQDGKKVRGRRYPWGL 366
            ..|..    ||...|     ::.|..:|.....|.:.|......:.....:.|::|    .|.|.
plant   712 GTASS----YDMFVTQRSHVIQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRV----LPNGQ 768

  Fly   367 VEVENLTHCDF----IALRNMVIRTHLQDLKDVTNNVHYENYRCRK--------LSELGLVDGKA 419
            |...:|....|    :|..|.:::  |||      |:....:..|.        ||.|    .::
plant   769 VWKPHLLLLSFASKILAEANALLK--LQD------NIPGRPFAARSKAPPLPFLLSSL----LQS 821

  Fly   420 RLSNKNPLTQMEEEKRE---HEQKMKKMEAEMEQV--FDMKVKEKMQKLRDSELE--LARRHEER 477
            |...|.|..|..:|:.|   .|......|:|.:|:  |....|.:|..|..|:.:  |.......
plant   822 RPQPKLPEQQYGDEEDEDDLEESSDSDEESEYDQLPPFKSLTKAQMATLSKSQKKQYLDEMEYRE 886

  Fly   478 KKALELQIRELEEKRREFEREKKEWEDVNHVTLEELKRRSLGANS 522
            |..::.|::|..::|:.|::...|.:|:.....|.::..|.|..|
plant   887 KLLMKKQMKEERKRRKMFKKFAAEIKDLPDGYSENVEEESGGPAS 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 90/439 (21%)
Septin 139..411 CDD:279124 66/334 (20%)
TOC132NP_001324729.1 3a0901s04IAP86 454..1206 CDD:273381 117/552 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D845354at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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