DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnut and Septin14

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_038945695.1 Gene:Septin14 / 689118 RGDID:1596186 Length:486 Species:Rattus norvegicus


Alignment Length:454 Identity:160/454 - (35%)
Similarity:260/454 - (57%) Gaps:36/454 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 AQKP-----QKP----PLPVRQKPMEIAGYVGFANLPNQVYRKAVKRGFEFTLMVVGASGLGKST 157
            |:||     |.|    |.....:.:...|:.||..||.|:..|::::||.|.::.||.:|:||||
  Rat     2 AEKPINTLVQTPGSEDPENENIRCLTTLGHFGFECLPTQLVNKSIQKGFSFNILCVGETGIGKST 66

  Fly   158 LINSMFLSDIYNAEQYPGPSLRKKKTVAVEATKVMLKENGVNLTLTVVDTPGFGDAVDNSNCWVP 222
            |||::|.:::..|:     |......|.::.....|.|..:.|.||||.|.|:||.::....:.|
  Rat    67 LINTLFNTNLKEAK-----SSHFYSKVGLKVKTYELLERNIPLKLTVVKTVGYGDQINKEASYQP 126

  Fly   223 ILEYVDSKYEEYLTAESRVYRK--TISDSRVHCCLYFIAPSGHGLLPLDIACMQSLSDKVNLVPV 285
            :::|:|:::|.||..|.::.|.  ...|||:|.|||||.|:||.|..||:..|:|:..:||::|:
  Rat   127 VVDYLDAQFEAYLQEELKIKRSMPDYHDSRIHVCLYFITPTGHSLKSLDLITMKSIDRRVNIIPL 191

  Fly   286 IAKADTMTPDEVHLFKKQILNEIAQHKIKIYDFPATLEDAAEEAKTTQNLRSRVPFAVVGANTII 350
            |||||:::.:::..||..|::|::.:.:.||.|.|.     :||....|....:||||||:...:
  Rat   192 IAKADSLSKNDLQRFKNNIMSELSSNGVHIYQFLAD-----DEATAQVNSSGLLPFAVVGSMEEV 251

  Fly   351 EQDGKKVRGRRYPWGLVEVENLTHCDFIALRNMVIRTHLQDLKDVTNNVHYENYRCRKLSELGLV 415
            :...:.|:||.||||:::|||..||||:.||::::.||::||||.|:..|||.||..:|.:||..
  Rat   252 KVGKRMVKGRHYPWGVLQVENENHCDFVKLRDLLLCTHMEDLKDQTHTQHYECYRSSRLQKLGFS 316

  Fly   416 DGKARLSNKNPLT--QMEEEKRE--HEQKMKKMEAEMEQVFDMKVKEKMQKLRDSELELARRHEE 476
            |   :..|..|::  :|.|.||:  |:| .::.|.|::|.|..:||||....:|:|.||..:.|.
  Rat   317 D---KGPNNKPVSFQEMYEAKRQEFHDQ-CQREEEELKQTFMQRVKEKELTFKDAEKELQDKFEH 377

  Fly   477 RKKALELQIRELEEKRREFERE-------KKEWEDVNHVTLEELKRRSLGANSSTDNVDGKKEK 533
            .|:..:.:|.:|||:||:.|.:       |...|........:...|..||..|.....|:.|:
  Rat   378 LKRIQQEEILKLEEERRKLEEQIIDFYKMKAASESAQAQPCFQRSPREAGAKESCPTGSGRGER 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 139/366 (38%)
Septin 139..411 CDD:279124 107/273 (39%)
Septin14XP_038945695.1 CDC_Septin 48..314 CDD:206649 107/275 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D845354at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.