DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnut and Septin3

DIOPT Version :10

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_038935716.1 Gene:Septin3 / 56003 RGDID:621745 Length:839 Species:Rattus norvegicus


Alignment Length:480 Identity:183/480 - (38%)
Similarity:261/480 - (54%) Gaps:68/480 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SNAVNGG---------SGGAISALPSTLAQLALRDKQQAASA-------------------SASS 42
            ||...||         |.||......|.|.....|..:..:|                   :.::
  Rat   358 SNEAKGGITRLDTVKASTGATVGKLYTAADFPALDTNRLGTAVDSVVLVCPDPTTGETRPHTVNN 422

  Fly    43 ATNGSSGSESLVGVGGRPPNQPPSVPVAASGKLDTSGGGAS-------NGDSNKLTHD-----LQ 95
            .||..:.:.:...:.......|....|.|....|::.|.||       .|.|..|..:     |.
  Rat   423 LTNPDTATYATSPLMVSKSTDPAQDHVTADASTDSTMGLASLDLDRELEGQSKSLAGEALLLGLP 487

  Fly    96 EKEHQQAQK---PQKPPLP-VRQKPMEI----AGYVGFANLPNQVYRKAVKRGFEFTLMVVGASG 152
            |.....|..   |:..|.| |..||:.|    .||:|...:..|:.:|.:|.||:|.:||||.||
  Rat   488 EARTDTAMSELVPEPRPKPAVPMKPVSINSNLLGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSG 552

  Fly   153 LGKSTLINSMFLSDI------YNAEQYPGPSLRKKKTVAVEATKVMLKENGVNLTLTVVDTPGFG 211
            ||||||:|::|.|.:      :|.|:      :..|||.::|...:::|.||.:.|||:||||||
  Rat   553 LGKSTLVNTLFKSQVSRKASSWNREE------KIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFG 611

  Fly   212 DAVDNSNCWVPILEYVDSKYEEYLTAESRVYR-KTISDSRVHCCLYFIAPSGHGLLPLDIACMQS 275
            |.::|.|||.||.:|::.:||::|..|..:.| |.|.|:|||||||||:|:||.|.|||:..|:.
  Rat   612 DQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKH 676

  Fly   276 LSDKVNLVPVIAKADTMTPDEVHLFKKQILNEIAQHKIKIY---DFPATLEDAAEEAKTTQNLRS 337
            ||..||::||||||||||.:|...||:::..|:..:.|:.|   :|...|||..|..|..|   .
  Rat   677 LSKVVNVIPVIAKADTMTLEEKSEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQ---E 738

  Fly   338 RVPFAVVGANTIIEQDGKKVRGRRYPWGLVEVENLTHCDFIALRNMVIRTHLQDLKDVTNNVHYE 402
            .:||||||::...:.:||:|.||:.|||::|||||.||:|..||:.||||||||||:||:|:|||
  Rat   739 SMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYE 803

  Fly   403 NYRCRKLSEL-GLVDGKARLSNKNP 426
            .||.::|::. ||..|:..|....|
  Rat   804 TYRAKRLNDNGGLPPGEGLLGTVLP 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 3a0901s04IAP86 58..>210 CDD:273381 59/177 (33%)
Septin 140..411 CDD:395596 139/280 (50%)
UDM1_RNF168 427..484 CDD:409018 183/480 (38%)
Septin3XP_038935716.1 CDC_Septin 540..814 CDD:206649 139/282 (49%)

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