DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnut and Tmem250

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001119767.1 Gene:Tmem250 / 499758 RGDID:1564379 Length:139 Species:Rattus norvegicus


Alignment Length:15 Identity:7/15 - (46%)
Similarity:10/15 - (66%) Gaps:2/15 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 GFEFTLMVVGASGLG 154
            |...|:::||  |||
  Rat   118 GIHVTMLLVG--GLG 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 7/15 (47%)
Septin 139..411 CDD:279124 7/15 (47%)
Tmem250NP_001119767.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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