DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnut and Septin12

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001094335.1 Gene:Septin12 / 363542 RGDID:1565511 Length:356 Species:Rattus norvegicus


Alignment Length:316 Identity:141/316 - (44%)
Similarity:209/316 - (66%) Gaps:17/316 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 AQKPQKPPLPVRQKPMEIAGYVGFANLPNQVYRKAVKRGFEFTLMVVGASGLGKSTLINSMFLSD 166
            :.:|..|..|    |.|:.|.||...:.:|:..||:|.||||.:||||.|||||||::|::|.|.
  Rat    11 SSRPSSPRTP----PCEMFGPVGIEAVLDQLRIKAMKTGFEFNIMVVGQSGLGKSTMVNTLFKSK 71

  Fly   167 IYNAEQYPGPSL--RKKKTVAVEATKVMLKENGVNLTLTVVDTPGFGDAVDNSNCWVPILEYVDS 229
            ::   |.|.|:|  ...:|:.:.:...:::|.|:.|.|||.|||||||.::|..||.|||.|::.
  Rat    72 VW---QSPAPNLDVPMPQTLELHSVTHVIEEKGLKLKLTVTDTPGFGDQINNDKCWDPILSYINQ 133

  Fly   230 KYEEYLTAESRVYR-KTISDSRVHCCLYFIAPSGHGLLPLDIACMQSLSDKVNLVPVIAKADTMT 293
            :||:||..|..:.| :.|.|:|||||:||:.|:||.|.||||..::.|...||:|||||:||::|
  Rat   134 QYEQYLQEELLITRQRHIPDTRVHCCVYFVPPTGHCLRPLDIEFLRRLCRTVNVVPVIARADSLT 198

  Fly   294 PDEVHLFKKQILNEIAQHKIKIYD---FPATLEDAAEEAKTTQNLRSRVPFAVVGANTIIEQDGK 355
            .:|...|:.:|...:..|.|.:|.   |...:.|....:|    :|.::|||||||:.....:|:
  Rat   199 IEERDAFRSRIQQNLKNHCIDVYPQQCFDEDINDRLLNSK----IREQIPFAVVGADREHIVNGR 259

  Fly   356 KVRGRRYPWGLVEVENLTHCDFIALRNMVIRTHLQDLKDVTNNVHYENYRCRKLSE 411
            .|.||:..||::||||:.||:|:.||:::||:|||||||:|:||||||||..:|:|
  Rat   260 CVLGRKTKWGIIEVENMAHCEFLLLRDLLIRSHLQDLKDITHNVHYENYRVLRLNE 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 136/297 (46%)
Septin 139..411 CDD:279124 128/277 (46%)
Septin12NP_001094335.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/15 (27%)
Interaction with SEPTIN7. /evidence=ECO:0000250|UniProtKB:Q8IYM1 44..317 129/279 (46%)
CDC_Septin 45..315 CDD:206649 128/276 (46%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01056 54..61 5/6 (83%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01056 110..113 2/2 (100%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01056 192..195 1/2 (50%)
Self-association (via N-terminus) to polymerize octomeric septin 12-7-6-2/4-2/4-6-7-12 filaments. /evidence=ECO:0000250|UniProtKB:Q8IYM1 256..356 35/60 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 330..356
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D452703at33208
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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