DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnut and Sep4

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster


Alignment Length:436 Identity:183/436 - (41%)
Similarity:263/436 - (60%) Gaps:44/436 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 PPNQPPSVPVAASG----KLDTSGGGASNGDSNKLTHDLQEKEHQQAQKP--QKPPLPVRQKPME 118
            |.:|||::...|:|    .:.|..|.:|:|           .|..:.:.|  .||..|...|..:
  Fly    11 PLSQPPTMGATAAGGVASVISTMNGSSSSG-----------IEAVKCRPPIYPKPKTPSFDKDRD 64

  Fly   119 IAGYVGFANLPNQVYRKAVKRGFEFTLMVVGASGLGKSTLINSMFLSDIYNAEQYPGPSLRKKKT 183
               |:|||.||.||:||:|||||||||||||.|||||||||||:||.|:|...|.|....|.:||
  Fly    65 ---YIGFATLPEQVHRKSVKRGFEFTLMVVGESGLGKSTLINSLFLGDLYKNRQMPNVEERIEKT 126

  Fly   184 VAVEATKVMLKENGVNLTLTVVDTPGFGDAVDNSNCWVPILEYVDSKYEEYLTAESRVYRKTISD 248
            ..||...:.::|.||.|.||||||||||||::..:.|....:|:|.::.:|.|.||.:.|:.|.|
  Fly   127 TKVEKKTMDIEERGVRLRLTVVDTPGFGDAINCEDSWRVCTQYIDEQFRQYFTDESGLNRRNIQD 191

  Fly   249 SRVHCCLYFIAPSGHGLLPLDIACMQSLSDKVNLVPVIAKADTMTPDEVHLFKKQILNEIAQHKI 313
            :||||||||:.|.||.|..:|:..::.|..|||:|.||.|||.:...||...|::||.::..:.|
  Fly   192 NRVHCCLYFVPPWGHSLRQMDLDLIRRLHRKVNIVLVIGKADCLNKQEVRKLKERILQDLEDNHI 256

  Fly   314 KIYDFPATLEDAAEEAK-TTQNLRSRVPFAVVGANTIIEQDGKKVRGRRYPWGLVEVENLTHCDF 377
            ::|.||....|..::.| ..:.|::.:||||||:|||:|..|||||||:||||:|.||:..|.||
  Fly   257 QLYQFPECDSDEDDDFKQQDRELKASIPFAVVGSNTILEVAGKKVRGRQYPWGVVNVEDPEHSDF 321

  Fly   378 IALRNMVIRTHLQDLKDVTNNVHYENYRCRKLSELG----LVDGKAR---LSNKNP--------- 426
            |.||..:|.||:|||||.|.:|||||:|.:.:|::.    ...||.:   :|:.|.         
  Fly   322 IKLRTFLISTHMQDLKDTTQDVHYENFRAQCISQISQHALRERGKLKRDSISSTNGFDAAISETD 386

  Fly   427 --LTQMEEEKREHEQKMKKMEAEMEQVFDMKVKEKMQKLRDSELEL 470
              |.|.:||.|..:..:.:|:.:::|...|::|:     .||.:::
  Fly   387 RLLLQKDEEIRRMQDMLTQMQEKLKQTHLMEMKK-----NDSVIDV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 167/369 (45%)
Septin 139..411 CDD:279124 139/272 (51%)
Sep4NP_573147.2 CDC3 65..420 CDD:227352 164/354 (46%)
CDC_Septin 82..357 CDD:206649 140/274 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D107010at6656
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2060
SonicParanoid 1 1.000 - - X204
76.950

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