DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnut and Septin10

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_006256477.1 Gene:Septin10 / 309891 RGDID:1359307 Length:462 Species:Rattus norvegicus


Alignment Length:452 Identity:170/452 - (37%)
Similarity:271/452 - (59%) Gaps:47/452 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 EKEHQQAQKPQKPPLPVRQKPMEIAGYVGFANLPNQVYRKAVKRGFEFTLMVVGASGLGKSTLIN 160
            :|||.::              :.:.|:|||.:||:|:..:::::||.|.::.||.:|:|||||||
  Rat    17 KKEHTRS--------------LTMCGHVGFESLPDQLVDRSIEQGFCFNILCVGETGIGKSTLIN 67

  Fly   161 SMFLSDIYNAEQYPGPSLRKKKTVAVEATKVMLKENGVNLTLTVVDTPGFGDAVDNSNCWVPILE 225
            ::|.::....|     |......|.:.|....|:|:.|.|.||:|:|.||||.::....:.||::
  Rat    68 TLFNTNFEELE-----SSHFCPCVRLRAQTYELQESNVRLKLTIVNTVGFGDQINKEESYQPIVD 127

  Fly   226 YVDSKYEEYLTAESRVYRKTIS--DSRVHCCLYFIAPSGHGLLPLDIACMQSLSDKVNLVPVIAK 288
            |:|:::|.||..|.::.|...:  |||:|.|||||||:||.|..||:..|:||.:|||::|:|||
  Rat   128 YIDNQFEAYLQEELKIKRALFNYHDSRIHVCLYFIAPTGHSLRTLDLLTMKSLDNKVNIIPLIAK 192

  Fly   289 ADTMTPDEVHLFKKQILNEIAQHKIKIYDFPATLEDAAEEAKTTQNLRSRVPFAVVGANTIIEQD 353
            |||::..|:..||.::::|:..:.::||.||.   |....||....:...:||||||:...|:..
  Rat   193 ADTISKSELQKFKMKLMSELVINGVQIYQFPT---DDDTTAKINGAMNGHLPFAVVGSMDEIKVG 254

  Fly   354 GKKVRGRRYPWGLVEVENLTHCDFIALRNMVIRTHLQDLKDVTNNVHYENYRCRKLSELGLVDGK 418
            .|.|:.|:||||:|:|||..||||:.||.|:|.|:::||::.|:..|||.||..||.|:|.:|  
  Rat   255 NKMVKARQYPWGIVQVENENHCDFVKLREMLICTNMEDLREQTHMRHYELYRRCKLQEMGFID-- 317

  Fly   419 ARLSNKN-PLTQMEE-EKREHE---QKMKKMEAEMEQVFDMKVKEKMQKLRDSELELARRHEERK 478
              :..:| ||:..|. |.:.||   ::.:| |.:|:|:|..:||||...|:::|.||..:.|..|
  Rat   318 --IGPENKPLSLQETYEAKRHEFCGERQRK-EEQMKQMFVQRVKEKEAILKEAERELQAKFEHLK 379

  Fly   479 KALELQIRELEEKRREFERE-----KKEWEDVNHVTLEELKRRSLGANSSTDNVDGKKEKKK 535
            :..:.:..:||||||..|.|     ||:      .|.|....:|..|:.|:...|  |::||
  Rat   380 RIHQEERMKLEEKRRMLEEESVAFAKKK------ATCELFPHQSFLASGSSIRRD--KDRKK 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 148/367 (40%)
Septin 139..411 CDD:279124 116/273 (42%)
Septin10XP_006256477.1 CDC3 27..399 CDD:227352 155/384 (40%)
CDC_Septin 46..314 CDD:206649 117/275 (43%)
GBP_C <343..399 CDD:303769 22/56 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D845354at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.