DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnut and spn1

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_594754.1 Gene:spn1 / 2543516 PomBaseID:SPAC4F10.11 Length:469 Species:Schizosaccharomyces pombe


Alignment Length:501 Identity:196/501 - (39%)
Similarity:296/501 - (59%) Gaps:67/501 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VAASG----KLDTSGGGASNGDSNKLTHDLQE-------KEHQQAQKPQK--------PPLPVRQ 114
            |.|.|    |.|::....|:.||...|.::.:       .|::..:||.:        |.:.:.|
pombe     5 VLADGMPTVKDDSTRSRGSDVDSFTSTDNVTQINVEAAISENKNEEKPIQDNSEQEFNPHVSIIQ 69

  Fly   115 KPMEIAGYVGFANLPNQVYRKAVKRGFEFTLMVVGASGLGKSTLINSMFLSDIYNAEQ------- 172
            :  ::.||||||:||||.:|:.|::||.|.::|:|.||.|||||:|::...|:|...|       
pombe    70 R--QLNGYVGFASLPNQWHRRCVRQGFNFNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDF 132

  Fly   173 --YPGPSLRKKKTVAVEATKVMLKENGVNLTLTVVDTPGFGDAVDNSNCWVPILEYVDSKYEEYL 235
              .|.|      ||.:.::.|.:.|||::|.|.|:|||||||.:||::||.|:|..::.:|::||
pombe   133 GVNPEP------TVMINSSAVEIVENGISLQLNVIDTPGFGDFIDNTDCWQPVLTDIEGRYDQYL 191

  Fly   236 TAESRVYRKTISDSRVHCCLYFIAPSGHGLLPLDIACMQSLSDKVNLVPVIAKADTMTPDEVHLF 300
            ..|....|.||.|.|||.|::||.|:||.:..:::..|.:|.:|||::|:||||||:|.||::..
pombe   192 ELEKHNPRSTIQDPRVHACIFFIQPTGHAISAMELRVMLALHEKVNIIPIIAKADTLTDDELNFT 256

  Fly   301 KKQILNEIAQHKIKIYDFPATLE-DAAEEAKTTQNLRSRVPFAVVGANT-IIEQDGKKVRGRRYP 363
            |:.||.:|..|.|:|: ||.|.| |..|......::.||:|||::.:|| ::..:||:|||||||
pombe   257 KEMILRDIQYHNIRIF-FPPTYETDDPESVAENADIMSRIPFAIIASNTFVVNNEGKRVRGRRYP 320

  Fly   364 WGLVEVENLTHCDFIALRNMVIRTHLQDLKDVTNNVHYENYRCRKLSELGLVDGKARLSNKNPLT 428
            ||:|||:|..|.||..||.|:|||||::||:.||.: ||.||..:|...|:....:.....||..
pombe   321 WGVVEVDNEEHSDFPKLREMLIRTHLEELKEQTNKL-YEAYRTERLLSSGISQDHSVFREVNPSA 384

  Fly   429 QMEEEKREHEQKMKKMEAEMEQVFDMKVKEKMQKLRDSELELARRHEERKKALELQIRELEEKRR 493
            ::|||:..||:|:.||||||:.:|..||:||..:|:.||.||..||.|.|.|||.|..:|     
pombe   385 KLEEERALHEEKLMKMEAEMKTIFSQKVQEKEDRLKQSENELRTRHREMKAALEKQKADL----- 444

  Fly   494 EFEREKKEWEDVNHVTLEELKRRSLGANSSTDNVDGKKEKKKKGLF 539
                       ::|      |.|.:.|.::.:|     ||.|:..|
pombe   445 -----------IDH------KNRLMQAKAAAEN-----EKSKRKFF 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 169/371 (46%)
Septin 139..411 CDD:279124 127/282 (45%)
spn1NP_594754.1 CDC3 73..459 CDD:227352 177/415 (43%)
CDC_Septin 92..369 CDD:206649 127/284 (45%)
Herpes_UL14 338..461 CDD:281566 55/150 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 261 1.000 Domainoid score I370
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1354
Inparanoid 1 1.050 349 1.000 Inparanoid score I482
OMA 1 1.010 - - QHG51878
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 1 1.000 - - otm47095
orthoMCL 1 0.900 - - OOG6_104146
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2060
SonicParanoid 1 1.000 - - X204
TreeFam 1 0.960 - -
1413.860

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