DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnut and spn4

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001342848.1 Gene:spn4 / 2542193 PomBaseID:SPAC9G1.11c Length:380 Species:Schizosaccharomyces pombe


Alignment Length:382 Identity:143/382 - (37%)
Similarity:228/382 - (59%) Gaps:23/382 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 EIAGYVGFANLPNQVYRKAVKRGFEFTLMVVGASGLGKSTLINSMFLSDIYNAEQYPGP-SLRKK 181
            |...:||.|:||||.::...:.|..||||:.|.|||||:|..|::|.:.|   :.:.|| .:|.|
pombe     4 EETNFVGIADLPNQRHKIVSRNGVAFTLMLCGESGLGKTTFCNTLFSTTI---KSHMGPEKVRAK 65

  Fly   182 ---KTVAVEATKVMLKENGVNLTLTVVDTPGFGDAVDNSNCWVPILEYVDSKYEEYLTAESRVYR 243
               |||.:|.||..|:|...:|.|||:|||||||.::||.||..::|:::.::|.|:..:.:..|
pombe    66 HAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINNSGCWESVVEFIEDQHESYMRQDQQPDR 130

  Fly   244 KTISDSRVHCCLYFIAPSGHGLLPLDIACMQSLSDKVNLVPVIAKADTMTPDEVHLFKKQILNEI 308
            :.|.|.|:|.||||:.|..:|:.|:|:..|:.:|.:|||:|||||||..|..::.|:|.:|...:
pombe   131 RKIIDMRIHACLYFLRPVRNGVRPMDLEAMKHISKRVNLIPVIAKADMYTRRDLALYKTRISQVL 195

  Fly   309 AQHKIKIYDFPATLEDAAEEAKTTQNLRSRVPFAVVGA-NTIIEQDGKKVRGRRYPWGLVEVENL 372
            ..|::.:|. |...|......:..|.:.:.:|||:||: :.|...||:.|:||.||||:||:||.
pombe   196 EYHQVNVYK-PNMDEGDPVFHRQIQGIINCMPFAIVGSEDDIRTPDGRVVKGREYPWGIVEIENE 259

  Fly   373 THCDFIALRNMVIRTHLQDLKDVTNNVHYENYRCRKLSELGLVDGKARLSNKNPLTQMEEEK-RE 436
            .||||..|||::||:.:.||...|....||.||..::        |.|...:..|..::..| :|
pombe   260 EHCDFKQLRNILIRSCMLDLIQTTEEKLYEQYRQEQM--------KVRQYGEPKLRTIDNAKFKE 316

  Fly   437 HEQKMKKMEAEMEQVFDMKVKEKMQKL---RDS-ELELARRHEERKKALELQIRELE 489
            .|:.::|...|..:|.:.:.::..|:|   ||| ..:|..:|.:.|: :||:|..|:
pombe   317 EEENLRKRFTEQVRVEETRFRQWEQRLIAERDSLNKDLEAQHVQIKQ-IELEIERLK 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 138/370 (37%)
Septin 139..411 CDD:279124 114/276 (41%)
spn4NP_001342848.1 CDC3 6..376 CDD:227352 142/380 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51878
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2060
SonicParanoid 1 1.000 - - X204
TreeFam 1 0.960 - -
87.910

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