DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnut and spn7

DIOPT Version :10

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_001343003.1 Gene:spn7 / 2540413 PomBaseID:SPBC19F8.01C Length:428 Species:Schizosaccharomyces pombe


Alignment Length:411 Identity:112/411 - (27%)
Similarity:201/411 - (48%) Gaps:35/411 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 KRGFEFTLMVVGASGLGKSTLINSMFLSDIYNAEQYPGP-SLRKKKTVAVEATKVMLKENGVNLT 201
            |:|.:..:||.|:|.......|||:....|..||....| .....:.:.:......:.|:..::.
pombe    14 KKGKKLRIMVAGSSYTSYQACINSLCSKQILEAETEIDPLKAHIDRILEIREFNADILEDEFHVD 78

  Fly   202 LTVVDTPGFGDAVDNSNCWVPILEYVDSKYEEYLTAESRVYRKT-ISDSRVHCCLYFIAPSGHGL 265
            |||::..||||.:|||..:..:..|::|::::.|..||::.|.: .:|:||...||||||.||.|
pombe    79 LTVIEVNGFGDKIDNSASFEVVTHYLESQFDQALIEESKIKRNSKFTDTRVDALLYFIAPRGHCL 143

  Fly   266 LPLDIACMQSLSDKVNLVPVIAKADTMTPDEVHLFKKQILNEIAQHKIKIYDFP-ATLEDAAEEA 329
            ...|:..|:..|.:||::|||..::..|.:|:..||..|:.::.|..||::||| ...||..|..
pombe   144 SEFDLEAMKRFSKRVNVIPVIGNSNAFTEEELKNFKDVIMKDLKQCNIKVFDFPWDPEEDEDEVI 208

  Fly   330 KTTQNLRSRVPFAVVGANTIIEQDGKKVRGRRYPWGLVEVENLTHCDFIALRNMVIRTHLQDLKD 394
            :..:.|...|||||.|..:..:::|.:...:::.||...:::..|.||:.|:.::..:||..||.
pombe   209 EDNKRLWESVPFAVSGGVSEEDEEGYQRIVKKFQWGTFVIDDPAHSDFLNLKTVLFISHLDILKS 273

  Fly   395 VTNNVHYENYRCRKLSELGLVDGKARLSNKNPLTQMEEEKREHEQKMKKMEAEMEQ------VFD 453
            :|...:|||||..|||.....:....|..:|.:...|:::..:..:..:..:.::|      |.|
pombe   274 ITKQTYYENYRTEKLSNDSPSNTSLSLQKQNSIVANEDKRSVNGSERTETRSSIDQSEMRTNVSD 338

  Fly   454 MKVKEKMQKLRD------SELELARRHEERKKALELQIRELEEK---RREF-------------- 495
            ....|:::|:..      |.|:.......:.|..:|...::..:   .:||              
pombe   339 STKSEELKKINSIKVDNTSSLKCDSYGNTKTKTNQLNCEQIGLEVISPKEFPHRTTSSRNSLPNN 403

  Fly   496 ---EREKKEWEDVNHVTLEEL 513
               |.|.|:.:|::|...|.|
pombe   404 TTKELEMKKMDDLSHERYENL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 3a0901s04IAP86 58..>210 CDD:273381 17/72 (24%)
Septin 140..411 CDD:395596 89/273 (33%)
UDM1_RNF168 427..484 CDD:409018 9/68 (13%)
spn7NP_001343003.1 CDC3 1..351 CDD:227352 99/336 (29%)

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