DRSC/TRiP Functional Genomics Resources

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Protein Alignment pnut and C18B2.5

DIOPT Version :10

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_741751.1 Gene:C18B2.5 / 180653 WormBaseID:WBGene00015956 Length:699 Species:Caenorhabditis elegans


Alignment Length:400 Identity:74/400 - (18%)
Similarity:126/400 - (31%) Gaps:144/400 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PRSNAVNGGS------------GGA---------ISALPSTLAQLALR-DKQQAASASASSATNG 46
            |||...:.||            ||.         :....:..|||:.: |:|:|.:...:.|...
 Worm   290 PRSELSSPGSVYSSHTQASFHTGGTQKLRNLQRQVEDAHAKKAQLSHQVDRQRADNDRMTHANLA 354

  Fly    47 SSGSESL--VGVGGRP-----------------PNQPPSVPVAASGKLDTSGGGASNGDSNKLTH 92
            ...|..:  :|.|.:|                 |.||                 .|:..|..:..
 Worm   355 REASLKVNKIGQGAKPQGYHVRSYSHEHDHHHLPPQP-----------------KSSHSSKSVDS 402

  Fly    93 DLQEKEHQQAQKPQKPPLPVRQK------------PMEIAGYVGFANL-PNQVYRKAVKRG---- 140
            .:.|:|..:..     ||..:||            .:.:..|....|. .|....|.:..|    
 Worm   403 SIYEEEEARVS-----PLAAKQKAAGEHIASSGKYELVVPQYYVVENFSKNDKINKVIIGGDAPP 462

  Fly   141 --FEFTLMVVGASGLGKSTLINSM--FLSDIYNAEQYPGPSLRKKKTVAVEATKVMLKENGVNLT 201
              .:.||::.|....||::.|.||  :|.|:.....:                :.:|.|: ||.|
 Worm   463 SDDDKTLLLFGPVNSGKTSAITSMMNYLYDVKKENDF----------------RFVLDEH-VNAT 510

  Fly   202 ----------------LTVVDTPGFGDAVDNSNCWVPILEYVDSKYEEYLTAESRVYRKTISDSR 250
                            :|||||||..|.:.|..    :...:...:|:.|..........||...
 Worm   511 TGLTAYVFNNTVLPYNVTVVDTPGVEDKMGNKT----VSRLIKQWFEKELLKSGSFRLDAISIVL 571

  Fly   251 VH-------CCLYFIAPSGHGLLPLDIACMQSLSDKVNLVPVIAKADTMTPDEVHLFKKQILNEI 308
            .|       ..:|.:|         |:..|.....|.|::|:|..::.: |..:      .:..:
 Worm   572 RHDENQLGWPFIYELA---------DVKRMFGDDLKTNVLPIITNSEVL-PQPI------AIKSL 620

  Fly   309 AQHKIKIYDF 318
            .|..|...::
 Worm   621 TQANISFLEY 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 3a0901s04IAP86 58..>210 CDD:273381 38/205 (19%)
Septin 140..411 CDD:395596 41/209 (20%)
UDM1_RNF168 427..484 CDD:409018
C18B2.5NP_741751.1 Ras_like_GTPase 470..>554 CDD:206648 22/104 (21%)
Blue background indicates that the domain is not in the aligned region.

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