DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pnut and sept4b

DIOPT Version :9

Sequence 1:NP_477064.1 Gene:pnut / 35801 FlyBaseID:FBgn0013726 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_021336990.1 Gene:sept4b / 100003446 ZFINID:ZDB-GENE-071127-1 Length:508 Species:Danio rerio


Alignment Length:490 Identity:215/490 - (43%)
Similarity:289/490 - (58%) Gaps:79/490 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DKQQAASASASSATNG--------SSGSESLVGVGGRPP-----NQP-----PSVPVAAS----G 73
            |:|.:..||.......        .|....|..:.||||     |:|     |::..||:    |
Zfish    38 DEQDSMPASPEPRARAVEKHLPKEDSEDSELEHIMGRPPPPEGHNRPHTPGTPTLRPAAAPRGPG 102

  Fly    74 KLDTSGGGASNGDSNKLTHDLQEKEHQQAQKPQKPPLP-VRQKPMEIA-----GYVGFANLPNQV 132
            :.::..||........|...:         .|.:|..| .|..|.:..     .|||||.|||||
Zfish   103 EHESRTGGQRGRVEFSLPSPI---------SPSRPKSPWGRYDPYDATEDQDKEYVGFATLPNQV 158

  Fly   133 YRKAVKRGFEFTLMVVGASGLGKSTLINSMFLSDIY------NAEQYPGPSLRKKKTVAVEATK- 190
            :||:||:||:|||||.|.||||||||:||:||:|:|      |||:        :.|..||.|| 
Zfish   159 HRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYKDRKLLNAEE--------RITQTVEITKH 215

  Fly   191 -VMLKENGVNLTLTVVDTPGFGDAVDNSNCWVPILEYVDSKYEEYLTAESRVYRKTISDSRVHCC 254
             |.::|.||.|.||:||||||||||:|:.||..:.:|:|.::|:|...||.:.||.|.|:|||||
Zfish   216 TVDIEEKGVKLKLTIVDTPGFGDAVNNTECWKSVADYIDQQFEQYFRDESGLNRKNIQDNRVHCC 280

  Fly   255 LYFIAPSGHGLLPLDIACMQSLSDKVNLVPVIAKADTMTPDEVHLFKKQILNEIAQHKIKIYDFP 319
            ||||:|.||||.|||:..|::|.:|||:|||:|||||:||.||...|.:|..||.|:.||||.||
Zfish   281 LYFISPFGHGLRPLDVEFMKALHEKVNIVPVLAKADTLTPLEVKKKKIKIREEIEQYGIKIYQFP 345

  Fly   320 ATLEDAAEEAK-TTQNLRSRVPFAVVGANTIIEQDGKKVRGRRYPWGLVEVENLTHCDFIALRNM 383
            ....|..||.| ..|.|:..:||||:|:||::|..||:||||.||||:|||||..||||:.||||
Zfish   346 DCDSDEDEEFKQQDQELKDSIPFAVIGSNTVVEAKGKRVRGRLYPWGIVEVENPAHCDFVKLRNM 410

  Fly   384 VIRTHLQDLKDVTNNVHYENYRCRKLSELGLVDGKARLSNKNPLTQ----------------MEE 432
            ::|||:|||||||...||||||...:..:..:..|.|  |:|.||:                .|.
Zfish   411 LVRTHMQDLKDVTRETHYENYRAHCIQSMTRMVVKER--NRNKLTRESGTDFPIPTAPGVSDSET 473

  Fly   433 EK--REHEQKMKKMEAEMEQVFDMKVKEKMQKLRD 465
            ||  ||.::::::|: ||.|    |::|:|...|:
Zfish   474 EKLIREKDEELRRMQ-EMLQ----KIQEQMHSQRE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pnutNP_477064.1 CDC3 121..482 CDD:227352 191/372 (51%)
Septin 139..411 CDD:279124 158/280 (56%)
sept4bXP_021336990.1 Atrophin-1 <12..130 CDD:331285 21/100 (21%)
Septin 166..438 CDD:307057 158/279 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51878
OrthoDB 1 1.010 - - D452703at33208
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X204
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.