DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpn and cwo

DIOPT Version :9

Sequence 1:NP_476923.1 Gene:dpn / 35800 FlyBaseID:FBgn0010109 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_524775.1 Gene:cwo / 44669 FlyBaseID:FBgn0259938 Length:698 Species:Drosophila melanogaster


Alignment Length:548 Identity:125/548 - (22%)
Similarity:189/548 - (34%) Gaps:210/548 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SDDDFDCSNGYSDSYGSNGRMSNPNGLSKAELRKTNKPIMEKRRRARINHCLNELKSLILEAMKK 73
            |:||.:.:.      |...:.|..:.||..        |:|||||.|:|.||.:|..||      
  Fly    45 SEDDAEYAT------GRRNKTSRQDPLSHR--------IIEKRRRDRMNSCLADLSRLI------ 89

  Fly    74 DPARHT-----KLEKADILEMTVKHLQSVQR--QQLNMAIQSDPSVVQKFKTGFVECAEEVNRYV 131
             |.::.     ::||.:|:||.::||:.:|.  ||.    :||      :::|:::|.:|..:::
  Fly    90 -PPQYQRKGRGRIEKTEIIEMAIRHLKHLQSECQQK----ESD------YRSGYMDCMKEAAKFL 143

  Fly   132 SQMDGIDTGVR--QRLSAHLNQ-----CANSLEQIGSMSNFSNGYRGGLFPATAVTAAPTPLF-P 188
            ..:...|...|  .||..|:::     |..|........|.|           |.:.:|...: |
  Fly   144 YDVHMQDFCHRLLGRLQEHIDEMFKTDCYKSTRSCHMPDNVS-----------ASSGSPHQAYHP 197

  Fly   189 SL----------------PQD------------LNNNSRTESSAPAIQMGGLQL----------- 214
            .|                .||            ||...|::.:|.|..:....:           
  Fly   198 PLCHLRDMLATSASDVEHSQDHNDVKDLSFRNHLNQLQRSQQAAAAAAVAAAAVAVANGSSPASN 262

  Fly   215 --IPSRLPSGEFALIMPNTG--SAAPP-----PGPFAWPGSAAGVAAGTASAALASIANPTHLND 270
              :.|::|       :.|.|  ..|||     |......||||..|.|.::::.::.:|..    
  Fly   263 AGVDSKVP-------LTNGGGTGGAPPAADNVPSNSTGSGSAAACAGGNSNSSGSNSSNAA---- 316

  Fly   271 YTQSFRMSAFSKPVNTSVPANLPENLIHTLPGQTQLPVKNSTSPPLSPISSISSH--CEESRAAS 333
                  .|....|...|.||.:.....|..|.|.  ||..||:|......:.|||  .|.||...
  Fly   317 ------SSTICPPAGGSCPAKVTPLAAHQQPHQA--PVITSTAPHHHHHHTDSSHHDFESSREPI 373

  Fly   334 PTVDVMSKHSFAGVFSTPPPTS--------AETSFNTSGSL------NLSAGSHD---------- 374
            ...|..:.||       |||..        ...|.:|..||      |.|..||:          
  Fly   374 LHTDTSNMHS-------PPPRDLLLQQHPHLAHSHHTQDSLMSVRMRNYSESSHEIEHNNNYKYK 431

  Fly   375 -----------------SSGCSRPLA--------HLQQQQVSSTSG--------IAKRDREAEA- 405
                             |..|  |:|        |||.....|..|        :||:.:.||| 
  Fly   432 NHIKERFVHELHDEETSSEHC--PVAAHLQSDHSHLQALSEHSKDGTEPEIAPIMAKKRKLAEAA 494

  Fly   406 -----------ESSDCS------LDEPS 416
                       |||:..      ||:||
  Fly   495 ANGEIPLEVHTESSNAGASSANRLDKPS 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpnNP_476923.1 HLH 39..101 CDD:238036 22/68 (32%)
ORANGE 114..158 CDD:128787 10/50 (20%)
cwoNP_524775.1 HLH 66..118 CDD:306515 22/66 (33%)
ORANGE 126..168 CDD:128787 10/47 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438373
Domainoid 1 1.000 45 1.000 Domainoid score I4621
eggNOG 1 0.900 - - E1_KOG4304
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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