DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpn and her9

DIOPT Version :10

Sequence 1:NP_476923.1 Gene:dpn / 35800 FlyBaseID:FBgn0010109 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_571948.1 Gene:her9 / 140613 ZFINID:ZDB-GENE-011213-1 Length:291 Species:Danio rerio


Alignment Length:327 Identity:117/327 - (35%)
Similarity:164/327 - (50%) Gaps:84/327 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AELRKTNKPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQRQQL 102
            :|.||::|||||||||||||..|.:||:|||:|:|||.:||:|||||||||||||||:::||.|:
Zfish    32 SEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQM 96

  Fly   103 NMAIQSDPSVVQKFKTGFVECAEEVNRYVSQMDGIDTGVRQRLSAHLNQCANSLEQIGSM--SNF 165
            :.|:.:|.:|:.|::.||.||..||.|::|..:|::|.||.||..||:.|      :|.|  .|:
Zfish    97 SAALSADTNVLSKYRAGFNECMNEVTRFLSTCEGVNTEVRSRLLNHLSGC------MGQMMAMNY 155

  Fly   166 SNGYRGGLFPATAVTA-APTPLFPSLPQDLNNN--------SRTESSAPAIQMGGLQLIPSRLPS 221
            ..       ||.|..| ...||...||..|..|        |.:|:.:|.: .||.||:|:  ..
Zfish   156 PQ-------PAPAQQAHLAQPLHVQLPSTLPINGASMGSKLSPSEAVSPKV-FGGFQLVPA--TD 210

  Fly   222 GEFALIMPNTGSAAPPPGPFAWPGSAAGVAAGTASAALASIANPTHLNDYTQSFRMSAFSKPVNT 286
            |:||.::||                          .|.||...|             ......|.
Zfish   211 GQFAFLIPN--------------------------PAFASATTP-------------VIPLYANA 236

  Fly   287 SVPANLPENLIHTLPGQTQLPVKNSTSPPL-SPISSISSHCEESRAASPTVDVMSKHSFAGVFST 350
            |||..:..:           ||:.|::|.: ||:..::|.....:|.|| |.|.     ||..|.
Zfish   237 SVPVTVNAS-----------PVQASSAPTVASPVQGMTSFSGVPQAVSP-VGVS-----AGAESN 284

  Fly   351 PP 352
            .|
Zfish   285 EP 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpnNP_476923.1 bHLH-O_hairy_like 39..105 CDD:381483 46/65 (71%)
ORANGE 114..158 CDD:128787 18/43 (42%)
her9NP_571948.1 bHLH-O_HES1_4 33..95 CDD:381465 45/61 (74%)
Hairy_orange 109..147 CDD:462193 18/43 (42%)

Return to query results.
Submit another query.