DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpn and helt

DIOPT Version :10

Sequence 1:NP_476923.1 Gene:dpn / 35800 FlyBaseID:FBgn0010109 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_017951230.1 Gene:helt / 100486939 XenbaseID:XB-GENE-984868 Length:252 Species:Xenopus tropicalis


Alignment Length:313 Identity:73/313 - (23%)
Similarity:117/313 - (37%) Gaps:100/313 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQRQQLNMAIQSD-- 109
            ::|||||.|||.||:||...:..|:.|.  ...|||||:||||||::|:::....|......|  
 Frog    33 VIEKRRRDRINRCLSELGKTVPMALAKQ--NSGKLEKAEILEMTVQYLRALHATDLPRGRDKDLL 95

  Fly   110 PSVVQKFKTGFVECAEEVNRYVSQMDGIDTGVRQRLSAHLNQCANSLEQIGSMSNFSNGYRGGLF 174
            ......|..|:.||.:.:..|::.:        :|:....|:.|..:..:.|.::.|.       
 Frog    96 SEFANYFHYGYHECMKNLVHYLTTV--------ERMETKDNKYARIVAFLQSKAHLST------- 145

  Fly   175 PATAVTAAPTPLFPSLPQ---DLNNNSRTESSAPAIQMGGLQLIPSRLPSGEFALIMPNTGSAAP 236
                     .|:|..|.:   ....:|..:.::|         :.|..|        |.:|    
 Frog   146 ---------EPIFSPLQEVEVSCQLHSPPDYASP---------VDSTFP--------PCSG---- 180

  Fly   237 PPGPFAWPGSAAGVAAGTASAALASIANPTHLNDYTQSFRMSAFSKPVNTSVPANLPENLIHTLP 301
              |.|:|.|:|       .|..|..:.:||.::                           :...|
 Frog   181 --GSFSWHGTA-------RSPTLNYLGSPTAMS---------------------------LSCSP 209

  Fly   302 GQTQLPVKNSTSPPLSPISSISSHCEESRAASPTVDVMSKHSFAGVFSTPPPT 354
            .|     :::.|..|||:.|:..|.......|.|       |..||.||..||
 Frog   210 SQ-----QSAHSTFLSPVQSLDRHYLNFLGHSHT-------SNFGVHSTQHPT 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpnNP_476923.1 bHLH-O_hairy_like 39..105 CDD:381483 27/57 (47%)
ORANGE 114..158 CDD:128787 8/43 (19%)
heltXP_017951230.1 bHLH-O_HELT 30..85 CDD:381414 26/53 (49%)
Hairy_orange 101..141 CDD:462193 9/47 (19%)

Return to query results.
Submit another query.