| Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038948896.1 | Gene: | Lrp3 / 89787 | RGDID: | 619729 | Length: | 810 | Species: | Rattus norvegicus |
| Alignment Length: | 527 | Identity: | 137/527 - (25%) |
|---|---|---|---|
| Similarity: | 173/527 - (32%) | Gaps: | 179/527 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3366 GHIYWSDWETKSIEYCSIFNGQNCT--------TLITTIHRPMDLRVFHPYRQQQPMSGNPCLAA 3422
Fly 3423 NCS-TLCVLSP-----EEPYYKC--MCPTNFILADD-------------------------GRTC 3454
Fly 3455 RANCTAAHFECVNTYKCIPFYWRCDTQDDCGDGSDEPETCPPFHCEPGQYQCANKKCTHPSNLCD 3519
Fly 3520 GINQCGDGSDELNCDKFTCFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTPLVCKK 3584
Fly 3585 DQFQCGNNRCMPFVWVCDGDIDCPDKSDEANCDNVSCGPNDFQC-------DSGRC---IPLAWR 3639
Fly 3640 CDDDHDCPNGEDE----------------PASCFSSKATCDPTYFKCNNSK-------------C 3675
Fly 3676 IPGRWRCDYENDCGDGSDELNCQMRNCSESEFRCGTGK--CIKHNYRCDGEIHCDDNSDEINCNI 3738
Fly 3739 TCKENQFKC-AAFNTCINKQYKCDGDDDCPDGSDEVNC-TCHSDHFSCGNGKCIMSRWKCDGWDD 3801
Fly 3802 CLDGSDE 3808 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
| LDLa | 126..163 | CDD:238060 | |||
| EGF_CA | 246..283 | CDD:214542 | |||
| Ldl_recept_b | 449..487 | CDD:278487 | |||
| LY | 472..513 | CDD:214531 | |||
| LY | 817..852 | CDD:214531 | |||
| LDLa | 1057..1092 | CDD:197566 | |||
| LDLa | 1104..1134 | CDD:238060 | |||
| FXa_inhibition | 1289..1317 | CDD:291342 | |||
| LY | 1434..1476 | CDD:214531 | |||
| LY | 1477..1521 | CDD:214531 | |||
| LY | 1533..1567 | CDD:214531 | |||
| LY | 1568..1611 | CDD:214531 | |||
| FXa_inhibition | 1639..1676 | CDD:291342 | |||
| LY | 1794..1838 | CDD:214531 | |||
| LY | 2078..2112 | CDD:214531 | |||
| NHL | <2082..>2152 | CDD:302697 | |||
| NHL repeat | 2082..2120 | CDD:271320 | |||
| FXa_inhibition | 2269..2303 | CDD:291342 | |||
| LY | 2430..2471 | CDD:214531 | |||
| LY | 2475..2517 | CDD:214531 | |||
| LDLa | 2630..2661 | CDD:238060 | |||
| LDLa | 2671..2702 | CDD:238060 | |||
| LDLa | 2727..2759 | CDD:238060 | |||
| LDLa | 2773..2802 | CDD:238060 | |||
| LDLa | 2810..2844 | CDD:238060 | |||
| LDLa | 2848..2878 | CDD:238060 | |||
| LDLa | 2887..2916 | CDD:197566 | |||
| LDLa | 2938..2969 | CDD:197566 | |||
| LDLa | 2989..3015 | CDD:197566 | |||
| LDLa | 3030..3061 | CDD:238060 | |||
| EGF_CA | 3062..>3091 | CDD:214542 | |||
| EGF_CA | 3103..3141 | CDD:214542 | |||
| LY | 3212..3254 | CDD:214531 | |||
| LY | 3255..3297 | CDD:214531 | |||
| LY | 3299..3340 | CDD:214531 | |||
| LY | 3354..3389 | CDD:214531 | 6/22 (27%) | ||
| LDLa | 3458..3490 | CDD:238060 | 15/31 (48%) | ||
| LDLa | 3499..3533 | CDD:238060 | 6/33 (18%) | ||
| LDLa | 3582..3616 | CDD:238060 | 7/33 (21%) | ||
| LDLa | 3621..3652 | CDD:197566 | 10/40 (25%) | ||
| LDLa | 3663..3697 | CDD:238060 | 8/46 (17%) | ||
| LDLa | 3702..3736 | CDD:238060 | 11/35 (31%) | ||
| LDLa | 3776..3808 | CDD:197566 | 15/31 (48%) | ||
| LDLa | 3818..3849 | CDD:197566 | |||
| LDLa | 3860..3894 | CDD:238060 | |||
| NHL | 4029..>4158 | CDD:302697 | |||
| NHL repeat | 4034..4074 | CDD:271320 | |||
| NHL repeat | 4076..4115 | CDD:271320 | |||
| LY | 4108..4150 | CDD:214531 | |||
| NHL repeat | 4121..4158 | CDD:271320 | |||
| EGF_CA | <4386..4414 | CDD:238011 | |||
| EGF_CA | 4415..4450 | CDD:238011 | |||
| Lrp3 | XP_038948896.1 | CUB | 43..156 | CDD:238001 | 24/122 (20%) |
| LDLa | 166..200 | CDD:238060 | 17/34 (50%) | ||
| LDLa | 212..249 | CDD:238060 | 17/58 (29%) | ||
| CUB | 254..364 | CDD:238001 | 22/127 (17%) | ||
| LDLa | 416..452 | CDD:238060 | 11/35 (31%) | ||
| LDLa | 455..489 | CDD:238060 | 17/32 (53%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||