Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_003374.3 | Gene: | VLDLR / 7436 | HGNCID: | 12698 | Length: | 873 | Species: | Homo sapiens |
Alignment Length: | 877 | Identity: | 298/877 - (33%) |
---|---|---|---|
Similarity: | 421/877 - (48%) | Gaps: | 169/877 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 2622 CIAPVNT---------SCGLSQYNCHSGECIPLELTCDNVTHCADGSDEFRSYCIFRQCPETHFM 2677
Fly 2678 CQNHRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRCGSGECIPRKF 2742
Fly 2743 LCDSLKDCRDFSDEKMCAPIPCEKNDMTFVH---CG-NSTICIMPRWRCDGDPDCPDGTDELDCA 2803
Fly 2804 NHTSLSCDPGQFRCASGNCIAGSWHCDGEKDCPDGSDEINCRTECRHNQFACDKTCIPASWQCDG 2868
Fly 2869 KSDCEDGSDEGPQCPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPSGLGDEGSEDEGPQCG--G 2931
Fly 2932 VAHIPDCPPPAHLCTSGLCIDSHYVCDGDEDCPGGDDEYEGCVPAFQPHSCPGGSL---MHQCQD 2993
Fly 2994 GLCIFKNQTCDGKPDCGDGSDETSSLCAHTRGCNGTDDFRCKNGACIHADLLCDRRNDCADFSDE 3058
Fly 3059 EL--CNVNECLIPD-ICEHECEDKVVGYQCHCRPGYKVLPKSPHLCTDIDECDEQQPCSQTCINT 3120
Fly 3121 YGSYKCLCAKGYALVDHHT--CKATSNVSMELIFSNRYYIRQVDMTGNGSI-LINELSNAVALDY 3182
Fly 3183 DWDSQCLYWSDVTSTVGTIKRYCPKENKTQTLHQAMLK---NPDGLAVDWVAKNLYWCDKGLDTI 3244
Fly 3245 EVSQLDGKYRKVLINEYLREPRGIALHPYQQHIFWSDWGDSPHIGKAGMDGSNPKMIIRDGLGWP 3309
Fly 3310 NALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLARSINPLLNLHHIFAIAVWEGHIYWSDWE 3374
Fly 3375 TKSIEYCSIFNGQNCTTLITTIHRPMDLRVFHPYRQQQPMSGNPCLA----ANCSTLCVLSPE-- 3433
Fly 3434 --EPYYKCMCPTNFILADDGRTCRANCTAAHF 3463 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | |||
LY | 1477..1521 | CDD:214531 | |||
LY | 1533..1567 | CDD:214531 | |||
LY | 1568..1611 | CDD:214531 | |||
FXa_inhibition | 1639..1676 | CDD:291342 | |||
LY | 1794..1838 | CDD:214531 | |||
LY | 2078..2112 | CDD:214531 | |||
NHL | <2082..>2152 | CDD:302697 | |||
NHL repeat | 2082..2120 | CDD:271320 | |||
FXa_inhibition | 2269..2303 | CDD:291342 | |||
LY | 2430..2471 | CDD:214531 | |||
LY | 2475..2517 | CDD:214531 | |||
LDLa | 2630..2661 | CDD:238060 | 14/30 (47%) | ||
LDLa | 2671..2702 | CDD:238060 | 15/30 (50%) | ||
LDLa | 2727..2759 | CDD:238060 | 2/31 (6%) | ||
LDLa | 2773..2802 | CDD:238060 | 17/32 (53%) | ||
LDLa | 2810..2844 | CDD:238060 | 17/33 (52%) | ||
LDLa | 2848..2878 | CDD:238060 | 2/29 (7%) | ||
LDLa | 2887..2916 | CDD:197566 | 15/28 (54%) | ||
LDLa | 2938..2969 | CDD:197566 | 14/30 (47%) | ||
LDLa | 2989..3015 | CDD:197566 | 12/25 (48%) | ||
LDLa | 3030..3061 | CDD:238060 | 13/32 (41%) | ||
EGF_CA | 3062..>3091 | CDD:214542 | 13/29 (45%) | ||
EGF_CA | 3103..3141 | CDD:214542 | 20/39 (51%) | ||
LY | 3212..3254 | CDD:214531 | 19/44 (43%) | ||
LY | 3255..3297 | CDD:214531 | 21/41 (51%) | ||
LY | 3299..3340 | CDD:214531 | 11/40 (28%) | ||
LY | 3354..3389 | CDD:214531 | 10/34 (29%) | ||
LDLa | 3458..3490 | CDD:238060 | 1/6 (17%) | ||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
VLDLR | NP_003374.3 | LDLa | 33..67 | CDD:238060 | 16/35 (46%) |
LDLa | 71..103 | CDD:197566 | 15/31 (48%) | ||
Ldl_recept_a | 111..149 | CDD:278486 | 19/57 (33%) | ||
LDLa | 154..188 | CDD:238060 | 17/48 (35%) | ||
Ldl_recept_a | 192..224 | CDD:278486 | 16/56 (29%) | ||
Ldl_recept_a | 237..273 | CDD:278486 | 16/45 (36%) | ||
Ldl_recept_a | 276..312 | CDD:278486 | 14/37 (38%) | ||
Ldl_recept_a | 320..350 | CDD:278486 | 11/29 (38%) | ||
FXa_inhibition | 360..394 | CDD:291342 | 12/35 (34%) | ||
EGF_CA | 396..426 | CDD:214542 | 17/29 (59%) | ||
Ldl_recept_b | 481..521 | CDD:278487 | 10/43 (23%) | ||
LY | 505..547 | CDD:214531 | 19/41 (46%) | ||
Ldl_recept_b | 568..608 | CDD:278487 | 15/39 (38%) | ||
LY | 592..634 | CDD:214531 | 11/41 (27%) | ||
Ldl_recept_b | 655..694 | CDD:278487 | 9/38 (24%) | ||
FXa_inhibition | 706..749 | CDD:291342 | 12/42 (29%) | ||
Mucin | <751..813 | CDD:250634 | 1/8 (13%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |