DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRP1 and Lrp10

DIOPT Version :10

Sequence 1:NP_001260800.2 Gene:LRP1 / 35799 FlyBaseID:FBgn0053087 Length:4752 Species:Drosophila melanogaster
Sequence 2:NP_075369.2 Gene:Lrp10 / 65107 MGIID:1929480 Length:713 Species:Mus musculus


Alignment Length:392 Identity:98/392 - (25%)
Similarity:129/392 - (32%) Gaps:127/392 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  2603 SGQATCHCTQGVLAPDGRRC---IAPVNTSCGLSQYNCHS----------GECIPLELTCDNVT- 2653
            |..:..:||..:|....:..   ...::.:||......||          ....||:|...||| 
Mouse    51 SRSSPANCTWVILGSKDQTVTVRFQKLHLACGSEHLILHSPLQPPISLCEAPSGPLQLPGGNVTI 115

  Fly  2654 -------HCADGSDEFRSYC-IFRQCPETHFMCQNHRCIPKEHKCDGEQQCGDGSDET------- 2703
                   ....|.....:|. .:..|.:..|.|.||||||...:|||...|||||||.       
Mouse   116 TYSYAGARAPMGQGFLLTYSQDWLLCLQEEFQCLNHRCIPAAQRCDGIDACGDGSDEAGCSSDPF 180

  Fly  2704 ---------PLLCKCQSEDI--------------DMHPSN-------NNTKEMPDMFRC---GSG 2735
                     .|.|....||.              ..||.:       ::.:.:...|..   ..|
Mouse   181 PNLNPAPAPTLACNLTLEDFYGVFSSPGYSHLASVSHPQSCLWLLDPHDGRRLAVRFTALDLSYG 245

  Fly  2736 ECI-----------PRKFLCDSLKDCRDFSDEK-------------------------------- 2757
            :.:           ||     .|:....||:.|                                
Mouse   246 DAVHVYDGAGPPETPR-----LLRSLTHFSNGKAVTVETLSGQAVVSYHTVAWSSGRGFNATYHV 305

  Fly  2758 --MCAP--IPCEKNDMTFVHCGNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRC- 2817
              .|.|  .||...............|.....||||..||.|||||..|.     .|.||.|.| 
Mouse   306 RGYCLPWDRPCGLGSGLGASENLGERCYSEAQRCDGSWDCADGTDEEGCP-----GCPPGHFPCG 365

  Fly  2818 ASGN-----CIAGSWHCDGEKDCPDGSDEINCRTECRHNQFAC-DKTCIPASWQCDGKSDCEDGS 2876
            |:|.     |...:..|:.:..|.||:||..|| .|:...|.| |:.|:..:|.|||:.||.|||
Mouse   366 AAGTPGATACYLPADRCNYQTFCADGADERRCR-HCQPGNFRCRDEKCVYETWVCDGQPDCTDGS 429

  Fly  2877 DE 2878
            ||
Mouse   430 DE 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRP1NP_001260800.2 LDLa 87..118 CDD:197566
LDLa 126..163 CDD:238060
EGF_CA 246..283 CDD:214542
Ldl_recept_b 449..487 CDD:459654
LY 472..513 CDD:214531
LY 817..852 CDD:214531
LDLa 1057..1092 CDD:197566
LDLa 1104..1134 CDD:238060
LDLa 1191..1226 CDD:238060
FXa_inhibition 1289..1317 CDD:464251
LY 1434..1476 CDD:214531
LY 1477..1521 CDD:214531
LY 1533..1567 CDD:214531
LY 1568..1611 CDD:214531
FXa_inhibition 1639..1676 CDD:464251
LY 1751..1789 CDD:214531
LY 1794..1838 CDD:214531
LY 2078..2112 CDD:214531
NHL <2082..>2152 CDD:302697
NHL repeat 2082..2120 CDD:271320
FXa_inhibition 2269..2303 CDD:464251
LY 2430..2471 CDD:214531
LY 2475..2517 CDD:214531
LDLa 2630..2661 CDD:238060 11/48 (23%)
LDLa 2671..2702 CDD:238060 17/30 (57%)
LDLa 2727..2759 CDD:238060 8/79 (10%)
LDLa 2773..2802 CDD:238060 12/28 (43%)
LDLa 2810..2844 CDD:238060 14/39 (36%)
LDLa 2848..2878 CDD:238060 14/30 (47%)
LDLa 2887..2916 CDD:197566
LDLa 2938..2969 CDD:197566
LDLa 2989..3015 CDD:197566
LDLa 3030..3061 CDD:238060
EGF_CA 3062..>3091 CDD:214542
EGF_CA 3103..3141 CDD:214542
LY 3212..3254 CDD:214531
Ldl_recept_b 3275..3314 CDD:459654
LY 3299..3340 CDD:214531
LY 3354..3389 CDD:214531
LDLa 3458..3490 CDD:238060
LDLa 3499..3533 CDD:238060
LDLa 3582..3616 CDD:238060
LDLa 3621..3652 CDD:197566
LDLa 3663..3697 CDD:238060
LDLa 3702..3736 CDD:238060
LDLa 3776..3808 CDD:197566
LDLa 3818..3849 CDD:197566
LDLa 3860..3894 CDD:238060
YncE 3935..4148 CDD:442618
LY 4108..4150 CDD:214531
EGF_CA <4386..4414 CDD:238011
EGF_CA 4415..4450 CDD:238011
Lrp10NP_075369.2 CUB 35..135 CDD:238001 15/83 (18%)
LDLa 141..175 CDD:238060 19/33 (58%)
CUB 193..303 CDD:238001 13/114 (11%)
LDLa <331..354 CDD:238060 12/22 (55%)
LDLa 400..434 CDD:238060 16/32 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..636
Blue background indicates that the domain is not in the aligned region.

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