DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRP1 and lrp1aa

DIOPT Version :9

Sequence 1:NP_001260800.2 Gene:LRP1 / 35799 FlyBaseID:FBgn0053087 Length:4752 Species:Drosophila melanogaster
Sequence 2:XP_021335354.1 Gene:lrp1aa / 563149 ZFINID:ZDB-GENE-030131-7889 Length:4560 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRP1NP_001260800.2 LDLa 87..118 CDD:197566
LDLa 126..163 CDD:238060
EGF_CA 246..283 CDD:214542
Ldl_recept_b 449..487 CDD:278487
LY 472..513 CDD:214531
LY 817..852 CDD:214531
LDLa 1057..1092 CDD:197566
LDLa 1104..1134 CDD:238060
FXa_inhibition 1289..1317 CDD:291342
LY 1434..1476 CDD:214531
LY 1477..1521 CDD:214531
LY 1533..1567 CDD:214531
LY 1568..1611 CDD:214531
FXa_inhibition 1639..1676 CDD:291342
LY 1794..1838 CDD:214531
LY 2078..2112 CDD:214531
NHL <2082..>2152 CDD:302697
NHL repeat 2082..2120 CDD:271320
FXa_inhibition 2269..2303 CDD:291342
LY 2430..2471 CDD:214531
LY 2475..2517 CDD:214531
LDLa 2630..2661 CDD:238060
LDLa 2671..2702 CDD:238060
LDLa 2727..2759 CDD:238060
LDLa 2773..2802 CDD:238060
LDLa 2810..2844 CDD:238060
LDLa 2848..2878 CDD:238060
LDLa 2887..2916 CDD:197566
LDLa 2938..2969 CDD:197566
LDLa 2989..3015 CDD:197566
LDLa 3030..3061 CDD:238060
EGF_CA 3062..>3091 CDD:214542
EGF_CA 3103..3141 CDD:214542
LY 3212..3254 CDD:214531
LY 3255..3297 CDD:214531
LY 3299..3340 CDD:214531
LY 3354..3389 CDD:214531
LDLa 3458..3490 CDD:238060
LDLa 3499..3533 CDD:238060
LDLa 3582..3616 CDD:238060
LDLa 3621..3652 CDD:197566
LDLa 3663..3697 CDD:238060
LDLa 3702..3736 CDD:238060
LDLa 3776..3808 CDD:197566
LDLa 3818..3849 CDD:197566
LDLa 3860..3894 CDD:238060
NHL 4029..>4158 CDD:302697
NHL repeat 4034..4074 CDD:271320
NHL repeat 4076..4115 CDD:271320
LY 4108..4150 CDD:214531
NHL repeat 4121..4158 CDD:271320
EGF_CA <4386..4414 CDD:238011
EGF_CA 4415..4450 CDD:238011
lrp1aaXP_021335354.1 LDLa 37..70 CDD:197566
LDLa 82..115 CDD:197566
FXa_inhibition 171..199 CDD:317114
LY 281..324 CDD:214531
LY 326..368 CDD:214531
LY 371..411 CDD:214531
FXa_inhibition 497..529 CDD:317114
LY 561..603 CDD:214531
LY 605..643 CDD:214531
LY 650..699 CDD:214531
LY <710..743 CDD:214531
FXa_inhibition 812..848 CDD:317114
LDLa 859..891 CDD:197566
LDLa 901..934 CDD:238060
LDLa 941..973 CDD:197566
LDLa 984..1017 CDD:238060
LDLa 1021..1052 CDD:197566
LDLa 1068..1103 CDD:238060
LDLa 1112..1146 CDD:238060
LDLa 1151..1187 CDD:238060
FXa_inhibition 1190..1226 CDD:317114
LY 1342..1383 CDD:214531
LY 1385..1428 CDD:214531
LY 1429..1472 CDD:214531
LY 1618..1653 CDD:214531
LY 1655..1698 CDD:214531
LY 1702..1738 CDD:214531
LY <1749..1780 CDD:214531
FXa_inhibition 1852..1888 CDD:317114
LY 1918..1958 CDD:214531
LY 1961..2001 CDD:214531
LY 2002..2045 CDD:214531
LY 2047..2089 CDD:214531
FXa_inhibition 2161..2196 CDD:317114
SGL 2235..>2439 CDD:331563
Ldl_recept_b 2345..2386 CDD:278487
LY 2371..2412 CDD:214531
FXa_inhibition 2483..2518 CDD:317114
LDLa 2530..2559 CDD:294076
LDLa 2567..2601 CDD:238060
LDLa 2606..2640 CDD:238060
LDLa <2667..2689 CDD:238060
LDLa 2697..2731 CDD:238060
LDLa 2735..2767 CDD:238060
LDLa 2774..2807 CDD:197566
LDLa 2818..2850 CDD:197566
LDLa 2859..2891 CDD:197566
LDLa 2906..2940 CDD:238060
cEGF 2963..2986 CDD:315355
EGF_CA 2983..3013 CDD:214542
LY 3050..3094 CDD:214531
LY 3095..3137 CDD:214531
LY 3139..3181 CDD:214531
LY 3183..3224 CDD:214531
LY 3225..3265 CDD:214531
FXa_inhibition 3295..3331 CDD:317114
LDLa 3335..3366 CDD:238060
LDLa 3375..3409 CDD:238060
LDLa 3414..3449 CDD:238060
LDLa 3453..3486 CDD:197566
LDLa 3494..3527 CDD:197566
LDLa 3537..3571 CDD:238060
LDLa 3576..3610 CDD:238060
LDLa 3614..3648 CDD:238060
LDLa 3656..3688 CDD:238060
LDLa 3697..3733 CDD:238060
LDLa 3741..3776 CDD:238060
LY 3957..3993 CDD:214531
Ldl_recept_b 4014..4054 CDD:278487
LY 4038..4079 CDD:214531
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 176 1.000 Domainoid score I3559
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 2956 1.000 Inparanoid score I17
OMA 1 1.010 - - QHG46025
OrthoDB 1 1.010 - - D1326at33208
OrthoFinder 1 1.000 - - FOG0002316
OrthoInspector 1 1.000 - - otm24210
orthoMCL 1 0.900 - - OOG6_100345
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1742
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.880

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