Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021327248.1 | Gene: | lrp13 / 562438 | ZFINID: | ZDB-GENE-130729-1 | Length: | 1354 | Species: | Danio rerio |
Alignment Length: | 1462 | Identity: | 394/1462 - (26%) |
---|---|---|---|
Similarity: | 561/1462 - (38%) | Gaps: | 381/1462 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 2630 CGLSQYNC--HSGECIPLELTCDNVTHCADGSDEFRSYCIFRQCPET----HFMCQNHR-CIPKE 2687
Fly 2688 HKCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRCGSGECIPRKFLCDSLKDCRD 2752
Fly 2753 FSDEKMC----------APIPCEKNDMTFVH---------------------CGNSTICIMPRWR 2786
Fly 2787 CDGDPDCPDGTDELDCANHTSLSCDPGQFRCASG-NCIAGSWHCDGEKDCPDGSDEINC---RTE 2847
Fly 2848 CRHNQFACDKT--CIPASWQCDGKSDCEDGSDEGPQCPNRPCRPHLFQCKSSGRCIPQKWVCDGE 2910
Fly 2911 KDCPSGLGDEGSEDEGPQCGGVAHIPDCPPPAHLCTSGLCIDSH------YVCDGDEDCPGGDDE 2969
Fly 2970 YEGCVPAFQPHSCPGGSLMHQCQDGL-CIFKNQTCDGKPDCGDGSDETSSLCA------HTRGCN 3027
Fly 3028 GTDDFRCKNGACIHADLLCDRRNDCADFSDE-ELCNVNECLIPDICEHECEDKVVGYQCHCRPGY 3091
Fly 3092 KVLPKSPHL-CTDIDECDEQ-QPCSQTCINTYGSYKCLCAKGYAL-VDHHTCKATSNVSMELIFS 3153
Fly 3154 NRYYIRQVDMTGNGSILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKENKTQTLHQAM 3218
Fly 3219 LKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKY-----RKVLINEYLREPRGIALHPYQQHIF 3278
Fly 3279 WSDWGDSPHIGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRL 3343
Fly 3344 L-LARSINPLLNLHHIFAIAVWEGHIYWSDWETKSIEYCSIFNGQNCTTLITTIHRPMDLRVFHP 3407
Fly 3408 YRQQQPMSGNPCLAANCSTLCVLSPEEPYYKCMCPTNFILADDGRTCR-------------ANCT 3459
Fly 3460 AAHFECVNTYKCI-PFYWRCDTQDDCGDGSDEPETCPPFHCEPGQYQCANKKCTHPSNLCD---- 3519
Fly 3520 --------------GINQCGDGS--------------------DELNCDKFTCFDNHMKCGATAN 3550
Fly 3551 SSAFCVDNVKRCDGVKDCPGGEDESACTPLVC--------KKDQFQC----GNNRCMPFVWVCDG 3603
Fly 3604 DIDCPDKSDEANCDNVSCGPNDFQCDSGRCIPLAWRCDDDHDCPNGEDEPASCFSSKATCDPTYF 3668
Fly 3669 KCNNSKCIPGRWRCDYENDCGDGSDELNCQMRNCSESEFRCGTGKCIKHNYRCDGEIHCDDNSDE 3733
Fly 3734 INCNITCKENQFKCAAFNTCINKQYKCDGDDDC-------PDGSDEVNCTCHSDHFSCGNGKCIM 3791
Fly 3792 SRWKCDGWDDCLDGSDESLETCAKTHCHANAFKCRNQ-LCVRNSALCDGINDCGENEDESDAVCA 3855
Fly 3856 ALPKCRHD-QFQ---------------------CENDDCISKAFRCDGQYNCV--DGSDEMNCQP 3896
Fly 3897 PVCGFGSCSQICIEKKAGHYNCKCADGYHKGP 3928 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | |||
LY | 1477..1521 | CDD:214531 | |||
LY | 1533..1567 | CDD:214531 | |||
LY | 1568..1611 | CDD:214531 | |||
FXa_inhibition | 1639..1676 | CDD:291342 | |||
LY | 1794..1838 | CDD:214531 | |||
LY | 2078..2112 | CDD:214531 | |||
NHL | <2082..>2152 | CDD:302697 | |||
NHL repeat | 2082..2120 | CDD:271320 | |||
FXa_inhibition | 2269..2303 | CDD:291342 | |||
LY | 2430..2471 | CDD:214531 | |||
LY | 2475..2517 | CDD:214531 | |||
LDLa | 2630..2661 | CDD:238060 | 12/32 (38%) | ||
LDLa | 2671..2702 | CDD:238060 | 14/35 (40%) | ||
LDLa | 2727..2759 | CDD:238060 | 11/31 (35%) | ||
LDLa | 2773..2802 | CDD:238060 | 14/49 (29%) | ||
LDLa | 2810..2844 | CDD:238060 | 17/34 (50%) | ||
LDLa | 2848..2878 | CDD:238060 | 15/31 (48%) | ||
LDLa | 2887..2916 | CDD:197566 | 12/28 (43%) | ||
LDLa | 2938..2969 | CDD:197566 | 12/36 (33%) | ||
LDLa | 2989..3015 | CDD:197566 | 11/26 (42%) | ||
LDLa | 3030..3061 | CDD:238060 | 10/31 (32%) | ||
EGF_CA | 3062..>3091 | CDD:214542 | 7/28 (25%) | ||
EGF_CA | 3103..3141 | CDD:214542 | 19/39 (49%) | ||
LY | 3212..3254 | CDD:214531 | 17/46 (37%) | ||
LY | 3255..3297 | CDD:214531 | 18/41 (44%) | ||
LY | 3299..3340 | CDD:214531 | 11/40 (28%) | ||
LY | 3354..3389 | CDD:214531 | 8/34 (24%) | ||
LDLa | 3458..3490 | CDD:238060 | 4/32 (13%) | ||
LDLa | 3499..3533 | CDD:238060 | 9/71 (13%) | ||
LDLa | 3582..3616 | CDD:238060 | 10/45 (22%) | ||
LDLa | 3621..3652 | CDD:197566 | 3/30 (10%) | ||
LDLa | 3663..3697 | CDD:238060 | 4/33 (12%) | ||
LDLa | 3702..3736 | CDD:238060 | 9/33 (27%) | ||
LDLa | 3776..3808 | CDD:197566 | 5/31 (16%) | ||
LDLa | 3818..3849 | CDD:197566 | 8/31 (26%) | ||
LDLa | 3860..3894 | CDD:238060 | 11/57 (19%) | ||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
lrp13 | XP_021327248.1 | LDLa | 36..71 | CDD:238060 | 14/42 (33%) |
LDLa | 75..110 | CDD:238060 | 15/36 (42%) | ||
LDLa | 119..149 | CDD:238060 | 14/41 (34%) | ||
LDLa | 195..223 | CDD:238060 | 13/27 (48%) | ||
LDLa | 227..262 | CDD:238060 | 17/34 (50%) | ||
LDLa | 271..301 | CDD:238060 | 16/33 (48%) | ||
LDLa | 306..340 | CDD:238060 | 14/50 (28%) | ||
LDLa | 351..380 | CDD:238060 | 11/29 (38%) | ||
LDLa | 387..422 | CDD:238060 | 16/38 (42%) | ||
LDLa | 427..458 | CDD:197566 | 9/38 (24%) | ||
EGF_CA | 503..542 | CDD:311536 | 19/38 (50%) | ||
PHA02142 | <569..>666 | CDD:333147 | 32/100 (32%) | ||
LY | <622..648 | CDD:214531 | 13/25 (52%) | ||
Ldl_recept_b | 680..718 | CDD:278487 | 17/37 (46%) | ||
LY | 702..744 | CDD:214531 | 11/41 (27%) | ||
LY | 744..786 | CDD:214531 | 12/48 (25%) | ||
FXa_inhibition | 818..848 | CDD:317114 | 14/30 (47%) | ||
LY | 976..1021 | CDD:214531 | 8/47 (17%) | ||
FXa_inhibition | 1130..1162 | CDD:317114 | 10/40 (25%) | ||
LDLa | 1170..1202 | CDD:197566 | 8/31 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 161 | 1.000 | Domainoid score | I3979 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |