Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005157607.1 | Gene: | sorl1 / 497306 | ZFINID: | ZDB-GENE-050208-22 | Length: | 2213 | Species: | Danio rerio |
Alignment Length: | 1284 | Identity: | 364/1284 - (28%) |
---|---|---|---|
Similarity: | 539/1284 - (41%) | Gaps: | 298/1284 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 3005 GKPDCGDG-------SDETSSLC------------AHTRGCNGTDDFR---CKNGACIHADLLCD 3047
Fly 3048 RRNDCADFSDEELCNVNECLIPDICEHECEDKV--------VGYQCHCRPGYKVLPKSPHLCT-- 3102
Fly 3103 DID-ECD-EQQPCSQTCINTYGSYKCLCAKGYALVDHHTCKATSNVSMELIFSNRYYIRQVDMTG 3165
Fly 3166 --NGSILINELSNAVALDYDWDSQCLYWSDVTSTVGTIKRYCPKENKTQ-TLHQAMLKNPDGLAV 3227
Fly 3228 DWVAKNLYWCDKGLDTIEVSQLDGKYRKVLIN-EYLREPRGIALHPYQQHIFWSDWGD-SPHIGK 3290
Fly 3291 AGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLARSINPLLNL 3355
Fly 3356 HHIFAIAVWEGHIYWSDWETKSIEYCSIFNGQNCTTLITTIHRPMDLRVFHPYRQQQPMSGNPCL 3420
Fly 3421 AANCSTLCVLSPEEPYY-----------------KCMCPTNFILADDGRTC---RANCTAAHFEC 3465
Fly 3466 VNTYKCIPFYWRCDTQDDCGDGSDEPETCPPFHCEPG-QYQC-ANKKCTHPSNLCDGINQCGDGS 3528
Fly 3529 DELNCDKFTCFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTPLVCKKDQFQCGNNR 3593
Fly 3594 CMPFVWVCDGDIDCPDKSDEANC--DNVSCGPNDFQCDSGRCIPLAWRCDDDHDCPNGEDE-PAS 3655
Fly 3656 CFSSKATCDPTYFKCNNSKCIPGRWRCDYENDCGDGSDELNCQMRNCSESEFRC-GTGKCIKHNY 3719
Fly 3720 RCDGEIHCDDNSDE----INCNI------TCKENQFKCAAFNTCINKQYKCDGDDDCPDGSDEVN 3774
Fly 3775 CTCHSD--------HFSCGNGKCIMSRWKCDGWDDCLDGSDES-------LETCA--KTHCHANA 3822
Fly 3823 FKCRNQLCVRNSALCDGINDCGENEDESDAVC----------AALP---KCRHDQFQC-ENDDCI 3873
Fly 3874 SKAFRCDGQYNCVDGSDEMNCQ---PPVCGFGS-CS--QICI---EKKAGHYNC-------KCAD 3922
Fly 3923 GYHKGPEKNATCLASGPDQILLLASE------QEFRFILPAKQEGTTVVGFFQTDSLKIDVFDIL 3981
Fly 3982 IRPKDTLLFWIDSHHGKVHTMKIATPHVEGTGVRVRRDLKELTAFNIPELDDPKSLAV------- 4039
Fly 4040 -----DWISQ-------RVYIIDSRHNQILATDIEGKKYISLVSTGMNPTDIVLEPES--RIMIW 4090
Fly 4091 STLENGILVASLDGSNKKSLVERDVGWP--------------ISLSMDY 4125 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | |||
LY | 1477..1521 | CDD:214531 | |||
LY | 1533..1567 | CDD:214531 | |||
LY | 1568..1611 | CDD:214531 | |||
FXa_inhibition | 1639..1676 | CDD:291342 | |||
LY | 1794..1838 | CDD:214531 | |||
LY | 2078..2112 | CDD:214531 | |||
NHL | <2082..>2152 | CDD:302697 | |||
NHL repeat | 2082..2120 | CDD:271320 | |||
FXa_inhibition | 2269..2303 | CDD:291342 | |||
LY | 2430..2471 | CDD:214531 | |||
LY | 2475..2517 | CDD:214531 | |||
LDLa | 2630..2661 | CDD:238060 | |||
LDLa | 2671..2702 | CDD:238060 | |||
LDLa | 2727..2759 | CDD:238060 | |||
LDLa | 2773..2802 | CDD:238060 | |||
LDLa | 2810..2844 | CDD:238060 | |||
LDLa | 2848..2878 | CDD:238060 | |||
LDLa | 2887..2916 | CDD:197566 | |||
LDLa | 2938..2969 | CDD:197566 | |||
LDLa | 2989..3015 | CDD:197566 | 5/16 (31%) | ||
LDLa | 3030..3061 | CDD:238060 | 8/33 (24%) | ||
EGF_CA | 3062..>3091 | CDD:214542 | 6/36 (17%) | ||
EGF_CA | 3103..3141 | CDD:214542 | 6/39 (15%) | ||
LY | 3212..3254 | CDD:214531 | 16/42 (38%) | ||
LY | 3255..3297 | CDD:214531 | 16/43 (37%) | ||
LY | 3299..3340 | CDD:214531 | 13/40 (33%) | ||
LY | 3354..3389 | CDD:214531 | 11/34 (32%) | ||
LDLa | 3458..3490 | CDD:238060 | 14/31 (45%) | ||
LDLa | 3499..3533 | CDD:238060 | 14/35 (40%) | ||
LDLa | 3582..3616 | CDD:238060 | 15/33 (45%) | ||
LDLa | 3621..3652 | CDD:197566 | 15/30 (50%) | ||
LDLa | 3663..3697 | CDD:238060 | 12/33 (36%) | ||
LDLa | 3702..3736 | CDD:238060 | 13/38 (34%) | ||
LDLa | 3776..3808 | CDD:197566 | 14/39 (36%) | ||
LDLa | 3818..3849 | CDD:197566 | 10/30 (33%) | ||
LDLa | 3860..3894 | CDD:238060 | 18/34 (53%) | ||
NHL | 4029..>4158 | CDD:302697 | 26/132 (20%) | ||
NHL repeat | 4034..4074 | CDD:271320 | 11/58 (19%) | ||
NHL repeat | 4076..4115 | CDD:271320 | 7/40 (18%) | ||
LY | 4108..4150 | CDD:214531 | 7/32 (22%) | ||
NHL repeat | 4121..4158 | CDD:271320 | 3/5 (60%) | ||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
sorl1 | XP_005157607.1 | VPS10 | 130..754 | CDD:214740 | 35/142 (25%) |
Sortilin_C | 589..754 | CDD:292523 | 35/142 (25%) | ||
LY | 781..822 | CDD:214531 | 16/42 (38%) | ||
LY | 825..864 | CDD:214531 | 13/38 (34%) | ||
LY | 868..912 | CDD:214531 | 16/43 (37%) | ||
LY | 916..954 | CDD:214531 | 13/39 (33%) | ||
LDLa | 1079..1113 | CDD:238060 | 17/35 (49%) | ||
LDLa | 1118..1154 | CDD:238060 | 14/35 (40%) | ||
LDLa | 1159..1193 | CDD:238060 | 19/70 (27%) | ||
LDLa | 1242..1273 | CDD:238060 | 11/32 (34%) | ||
LDLa | 1282..1310 | CDD:197566 | 11/27 (41%) | ||
LDLa | 1327..1361 | CDD:238060 | 15/34 (44%) | ||
LDLa | 1376..1405 | CDD:238060 | 17/28 (61%) | ||
LDLa | 1421..1455 | CDD:238060 | 13/35 (37%) | ||
LDLa | 1474..1509 | CDD:238060 | 18/34 (53%) | ||
LDLa | 1522..1551 | CDD:238060 | 5/28 (18%) | ||
FN3 | 1559..>1630 | CDD:238020 | 11/77 (14%) | ||
FN3 | 1653..1743 | CDD:238020 | 21/102 (21%) | ||
FN3 | 1750..1827 | CDD:238020 | 5/22 (23%) | ||
FN3 | 1931..2007 | CDD:238020 | |||
FN3 | 2022..2097 | CDD:214495 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |