Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
Alignment Length: | 1698 | Identity: | 464/1698 - (27%) |
---|---|---|---|
Similarity: | 728/1698 - (42%) | Gaps: | 317/1698 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1251 FSKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCDRGHECSHRCHNTPEGY---------ICSCPD 1306
Fly 1307 HLYLQPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLGFDRFTCKSTAPDEPYV---- 1367
Fly 1368 --IFTNRQDIKGINLKTLNVGN-----FYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRGHL 1425
Fly 1426 VGESLRNV-----EAVIHSGLSTTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNME 1485
Fly 1486 SPRAIALDPREGLLFWTDWDDNSPRIERASMSGDG-RRMISTSWQLSAGWPNGLTLDYTQKRVYW 1549
Fly 1550 VDAKSDSISSTMYDGSEHHVVLRNKEILSHPFAISVFENYVYWTDWRTTSVIRANKWNGSDVQV- 1613
Fly 1614 ----LQRTQSQPFGIQVLHSSRQPWDRNPCGENNGGCSHLCLLSGRGT-FKCECPHVMRLDPANE 1673
Fly 1674 RNCVPNEQVLLFVMV-DEIRGIDLHQPNHHTIP-TIRQSPRLVAPQRIDFLVDESRIFWSDIQQN 1736
Fly 1737 EISSAGISNGLIEPIINTNIEKPYGFAVDWIARNMYFSSGQIKCNILASNLKGEFASI-IHEDLN 1800
Fly 1801 MVDSIVLDPANGKMYWIHSASDGS--MSQLEQSNLDGSSRSLIYQHENNL---QSLTMDFDSQRL 1860
Fly 1861 YYA---YDNSGIAYYDIPRNETRKVLVASPITSISSLTVYNGTLYFPENIQSVIMQCEKEACSNM 1922
Fly 1923 SYLRVNTKSIQSMKMFYADAQTGSNTCAEWAYRGGCQQLCLATSSIDHVCRCALGYDVEPNNPTG 1987
Fly 1988 CVPRAEFIFYSIDVLQGVEMIDPSEQFDTPSPALVPISRVSSASFIDYLANTDTLYWGDNELGSI 2052
Fly 2053 SRVKRDGTQRETILEALNLVGYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEVARLDGSHRYVVV- 2116
Fly 2117 SNLEKPTALAVDPLQGLLFYVTQ--QHIGRVGLDGSQPFVLVNQTRANWAVGSLVLDIEATKVYW 2179
Fly 2180 C-ERYPDALMKVDYDGNLREQLLNESLNNPVALAKMGDYLYWAENKYNEG-IIRVAPLANLSQSK 2242
Fly 2243 VVLQTEQDAIRDLKIYSKHLQRGSNPCAHSNGACEQLCLF--NGTSAVCAC-AHSRLASDGYSCE 2304
Fly 2305 PYENFLLFSYRSNIESI--HMTDHADKNWPVQMISNTSLMRNVIAITYNYEEQLVYYSDVQLSTI 2367
Fly 2368 NQVHFNGTGHRVLLEQQQRVEGLAYDIVNEQLFWTSNNNATIRSVELRHLSEHADQNQVHVKKVL 2432
Fly 2433 SLREDDKPRGIAVEPCLGMIYWTNWNEGS-PCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQK 2496
Fly 2497 LYWADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAVYGDLLFWTDWVLHAVVRANKYTGTDVLF 2561
Fly 2562 LREHVTRPMGIVAVQNTSINCDANQCKILN-GQCEDVCILNKSGQATCHCTQGVLAPDGRRCIAP 2625
Fly 2626 VNTSCGLSQYNCHSGECIPLELTCDNVTHCADGSDEFRSYCIFRQCPETHFMCQNHRCIPKEHKC 2690
Fly 2691 DGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRCGSGECIPRKFLCDSLKDCRDFSD 2755
Fly 2756 EKMCAPIPCEKNDMTFVHCGNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRCASG 2820
Fly 2821 NCIAGSWHCDGEKDCPDGSDEINCRTEC-RHNQFAC--DKTCIPASWQCDGKSDCEDGSDEGPQ- 2881
Fly 2882 CPNRPCRP 2889 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | 5/36 (14%) | ||
LY | 1434..1476 | CDD:214531 | 19/41 (46%) | ||
LY | 1477..1521 | CDD:214531 | 21/44 (48%) | ||
LY | 1533..1567 | CDD:214531 | 14/33 (42%) | ||
LY | 1568..1611 | CDD:214531 | 11/42 (26%) | ||
FXa_inhibition | 1639..1676 | CDD:291342 | 18/37 (49%) | ||
LY | 1794..1838 | CDD:214531 | 15/46 (33%) | ||
LY | 2078..2112 | CDD:214531 | 21/33 (64%) | ||
NHL | <2082..>2152 | CDD:302697 | 33/72 (46%) | ||
NHL repeat | 2082..2120 | CDD:271320 | 23/38 (61%) | ||
FXa_inhibition | 2269..2303 | CDD:291342 | 15/36 (42%) | ||
LY | 2430..2471 | CDD:214531 | 13/41 (32%) | ||
LY | 2475..2517 | CDD:214531 | 9/41 (22%) | ||
LDLa | 2630..2661 | CDD:238060 | 7/30 (23%) | ||
LDLa | 2671..2702 | CDD:238060 | 7/30 (23%) | ||
LDLa | 2727..2759 | CDD:238060 | 9/31 (29%) | ||
LDLa | 2773..2802 | CDD:238060 | 11/28 (39%) | ||
LDLa | 2810..2844 | CDD:238060 | 16/33 (48%) | ||
LDLa | 2848..2878 | CDD:238060 | 14/32 (44%) | ||
LDLa | 2887..2916 | CDD:197566 | 1/3 (33%) | ||
LDLa | 2938..2969 | CDD:197566 | |||
LDLa | 2989..3015 | CDD:197566 | |||
LDLa | 3030..3061 | CDD:238060 | |||
EGF_CA | 3062..>3091 | CDD:214542 | |||
EGF_CA | 3103..3141 | CDD:214542 | |||
LY | 3212..3254 | CDD:214531 | |||
LY | 3255..3297 | CDD:214531 | |||
LY | 3299..3340 | CDD:214531 | |||
LY | 3354..3389 | CDD:214531 | |||
LDLa | 3458..3490 | CDD:238060 | |||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 18/38 (47%) |
NHL | 168..503 | CDD:302697 | 122/352 (35%) | ||
NHL repeat | 172..237 | CDD:271320 | 27/65 (42%) | ||
LY | 252..293 | CDD:214531 | 15/40 (38%) | ||
NHL repeat | 261..298 | CDD:271320 | 13/36 (36%) | ||
NHL repeat | 303..339 | CDD:271320 | 12/41 (29%) | ||
NHL repeat | 341..419 | CDD:271320 | 29/79 (37%) | ||
NHL repeat | 428..476 | CDD:271320 | 10/50 (20%) | ||
LY | 472..511 | CDD:214531 | 12/39 (31%) | ||
NHL repeat | 477..503 | CDD:271320 | 10/26 (38%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 12/44 (27%) | ||
LY | 558..599 | CDD:214531 | 7/45 (16%) | ||
LY | 600..641 | CDD:214531 | 6/40 (15%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 16/38 (42%) | ||
LY | 739..773 | CDD:214531 | 8/33 (24%) | ||
LY | 776..818 | CDD:214531 | 24/48 (50%) | ||
LY | 819..860 | CDD:214531 | 10/40 (25%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 15/36 (42%) | ||
LY | 1122..1164 | CDD:214531 | 14/44 (32%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 13/59 (22%) | ||
LDLa | 1319..1362 | CDD:238060 | 24/105 (23%) | ||
LDLa | 1365..1399 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1399..1433 | CDD:197566 | 15/36 (42%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45461703 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |