Sequence 1: | NP_001260800.2 | Gene: | LRP1 / 35799 | FlyBaseID: | FBgn0053087 | Length: | 4752 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011543331.1 | Gene: | LRP5 / 4041 | HGNCID: | 6697 | Length: | 1662 | Species: | Homo sapiens |
Alignment Length: | 1582 | Identity: | 486/1582 - (30%) |
---|---|---|---|
Similarity: | 720/1582 - (45%) | Gaps: | 271/1582 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 1325 HWD---TCSQVCESSGKGYDCRCL---DGFDLGFDRFTCKSTAPDEPYVIFTNRQDIK-----GI 1378
Fly 1379 NLKTLNVGNFYSSLRNIIALDFLYNNESNVEIYWTDVIDDKIYRGHL--VGESLRNVEAVIHSGL 1441
Fly 1442 STTEGLAVDWVGKNLYWIDSNLDQIEVAKLNGSFRRTLIAGNMESPRAIALDPREGLLFWTDWDD 1506
Fly 1507 NSPRIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHVVL 1571
Fly 1572 RNKEILSHPFAISVFENYVYWTDWRTTSVIRANKWNGSDVQVLQRTQSQPFGIQVLHSSRQPWDR 1636
Fly 1637 NPCGENNGGCSHLCLLSGRGTF-KCECPHVMRLDPANERNCVPN-EQVLLFVMVDEIRGIDLHQP 1699
Fly 1700 NHHTIPTIRQSPRLVAPQRIDFLVDESRIFWSDIQQNEISSAGISNGLIEPIINTNIEKPYGFAV 1764
Fly 1765 DWIARNMYFS-SGQIKCNILASNLKGEFASI-IHEDLNMVDSIVLDPANGKMYWIHSASD-GSMS 1826
Fly 1827 QLEQSNLDGSSRSLIYQHENNL-QSLTMDFDSQRLYYA---YDNSGIAYYDIPRNETRKVLVASP 1887
Fly 1888 ITSISSLTVYNGTLYFPENIQSVIMQCEKEACSN----------MSYLRVNTKSIQSMKMFYADA 1942
Fly 1943 QTGSNTCAEWAYRGGCQQLCLATSSIDHVCRCALGYDVEPNNPTGCVPRAEFIFYSIDVLQGVEM 2007
Fly 2008 IDPSEQFDTPSPALVPISRVSSASFIDYLANTDTLYWGDNELGSISRVKRDGTQRETILEALNLV 2072
Fly 2073 GYKQQDWLGGIAIDWVAGNIYWSDTKRNIIEVARLDGSHRYVVV-SNLEKPTALAVDPLQGLLFY 2136
Fly 2137 VT---QQHIGRVGLDGSQPFVLVNQT-RANWAVGSLVLDIEATKVYWCERYPDALMKVDYDGNLR 2197
Fly 2198 EQ---------LLNESLNNPVALAKMGDYLYWAENKYNEGIIRVAPLANLSQSKVVLQTEQDAIR 2253
Fly 2254 DLKIYSKHLQRGSNPCAHSNGACEQLCLFNGTSAVCACA-HSRLASDGYSCEPYENFLLFSYRSN 2317
Fly 2318 IESIHMTDHADKNWPVQMISNTSLMRNVIAITYNYEEQLVYYSDVQLSTINQVHFNGTGHRVL-- 2380
Fly 2381 LEQQQRVE----GLAYDIVNEQLFWTSNNNATIRSVELRHLSEHADQNQVHVKKVLSLRED-DKP 2440
Fly 2441 RGIAVEPCLGMIYWTNWNEGSPCIQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLD 2505
Fly 2506 KIERTNYDGSNRVVLAHSTPKHAFAMAVYGDLLFWTDWVLHAVVRANKYTGTDVLFLREHVTRPM 2570
Fly 2571 GIVAVQNTSI-NCDANQCKILNGQCEDVCILNKSGQATCHCTQGVLAPDGRRCIAPVNTSCGLSQ 2634
Fly 2635 YNCHSGECIPLELTCDNVTHCADGSDEFRSYCIFRQCPETHFMCQNHRCIPKEHKCDGEQQCGDG 2699
Fly 2700 SDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRCGSGE--CIPRKFLCDSLKDCRDFSDEKMC--- 2759
Fly 2760 --APIPCEKNDMTFVHCGNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRCASGNC 2822
Fly 2823 IAGSWHCDGEKDCPDGSDEINC 2844 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP1 | NP_001260800.2 | LDLa | 87..118 | CDD:197566 | |
LDLa | 126..163 | CDD:238060 | |||
EGF_CA | 246..283 | CDD:214542 | |||
Ldl_recept_b | 449..487 | CDD:278487 | |||
LY | 472..513 | CDD:214531 | |||
LY | 817..852 | CDD:214531 | |||
LDLa | 1057..1092 | CDD:197566 | |||
LDLa | 1104..1134 | CDD:238060 | |||
FXa_inhibition | 1289..1317 | CDD:291342 | |||
LY | 1434..1476 | CDD:214531 | 24/41 (59%) | ||
LY | 1477..1521 | CDD:214531 | 22/43 (51%) | ||
LY | 1533..1567 | CDD:214531 | 16/33 (48%) | ||
LY | 1568..1611 | CDD:214531 | 16/42 (38%) | ||
FXa_inhibition | 1639..1676 | CDD:291342 | 20/37 (54%) | ||
LY | 1794..1838 | CDD:214531 | 18/45 (40%) | ||
LY | 2078..2112 | CDD:214531 | 19/33 (58%) | ||
NHL | <2082..>2152 | CDD:302697 | 32/73 (44%) | ||
NHL repeat | 2082..2120 | CDD:271320 | 21/38 (55%) | ||
FXa_inhibition | 2269..2303 | CDD:291342 | 14/34 (41%) | ||
LY | 2430..2471 | CDD:214531 | 16/41 (39%) | ||
LY | 2475..2517 | CDD:214531 | 16/41 (39%) | ||
LDLa | 2630..2661 | CDD:238060 | 2/30 (7%) | ||
LDLa | 2671..2702 | CDD:238060 | 4/30 (13%) | ||
LDLa | 2727..2759 | CDD:238060 | 16/33 (48%) | ||
LDLa | 2773..2802 | CDD:238060 | 11/28 (39%) | ||
LDLa | 2810..2844 | CDD:238060 | 19/33 (58%) | ||
LDLa | 2848..2878 | CDD:238060 | |||
LDLa | 2887..2916 | CDD:197566 | |||
LDLa | 2938..2969 | CDD:197566 | |||
LDLa | 2989..3015 | CDD:197566 | |||
LDLa | 3030..3061 | CDD:238060 | |||
EGF_CA | 3062..>3091 | CDD:214542 | |||
EGF_CA | 3103..3141 | CDD:214542 | |||
LY | 3212..3254 | CDD:214531 | |||
LY | 3255..3297 | CDD:214531 | |||
LY | 3299..3340 | CDD:214531 | |||
LY | 3354..3389 | CDD:214531 | |||
LDLa | 3458..3490 | CDD:238060 | |||
LDLa | 3499..3533 | CDD:238060 | |||
LDLa | 3582..3616 | CDD:238060 | |||
LDLa | 3621..3652 | CDD:197566 | |||
LDLa | 3663..3697 | CDD:238060 | |||
LDLa | 3702..3736 | CDD:238060 | |||
LDLa | 3776..3808 | CDD:197566 | |||
LDLa | 3818..3849 | CDD:197566 | |||
LDLa | 3860..3894 | CDD:238060 | |||
NHL | 4029..>4158 | CDD:302697 | |||
NHL repeat | 4034..4074 | CDD:271320 | |||
NHL repeat | 4076..4115 | CDD:271320 | |||
LY | 4108..4150 | CDD:214531 | |||
NHL repeat | 4121..4158 | CDD:271320 | |||
EGF_CA | <4386..4414 | CDD:238011 | |||
EGF_CA | 4415..4450 | CDD:238011 | |||
LRP5 | XP_011543331.1 | NHL | <46..>178 | CDD:302697 | 58/140 (41%) |
NHL repeat | 74..113 | CDD:271320 | 14/44 (32%) | ||
LY | 111..151 | CDD:214531 | 24/39 (62%) | ||
NHL repeat | 116..157 | CDD:271320 | 23/40 (58%) | ||
Ldl_recept_b | 172..212 | CDD:278487 | 22/43 (51%) | ||
LY | 196..238 | CDD:214531 | 18/44 (41%) | ||
FXa_inhibition | 308..345 | CDD:291342 | 20/37 (54%) | ||
LY | 375..415 | CDD:214531 | 8/39 (21%) | ||
LY | 417..459 | CDD:214531 | 16/43 (37%) | ||
LY | 460..503 | CDD:214531 | 18/46 (39%) | ||
LY | 504..546 | CDD:214531 | 6/44 (14%) | ||
LY | 547..580 | CDD:214531 | 5/32 (16%) | ||
FXa_inhibition | 614..649 | CDD:291342 | 11/37 (30%) | ||
NHL | 694..887 | CDD:302697 | 67/216 (31%) | ||
LY | 719..761 | CDD:214531 | 22/48 (46%) | ||
NHL repeat | 729..765 | CDD:271320 | 20/35 (57%) | ||
NHL repeat | 772..811 | CDD:271320 | 12/38 (32%) | ||
NHL repeat | 856..880 | CDD:271320 | 8/25 (32%) | ||
FXa_inhibition | 915..950 | CDD:291342 | 14/34 (41%) | ||
LY | 979..1018 | CDD:214531 | 11/39 (28%) | ||
LY | 1069..1112 | CDD:214531 | 17/42 (40%) | ||
LY | 1113..1155 | CDD:214531 | 16/41 (39%) | ||
FXa_inhibition | 1226..1262 | CDD:291342 | 13/108 (12%) | ||
Ldl_recept_a | 1267..1304 | CDD:278486 | 17/54 (31%) | ||
LDLa | 1307..1341 | CDD:238060 | 14/44 (32%) | ||
LDLa | 1345..1379 | CDD:238060 | 19/33 (58%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |